Gene PCC8801_0623 details

Gene Information

• Locus tag: PCC8801_0623
• ID: 7102746
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 652361
• End bp: 653515
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643473724
• Product: NAD-dependent epimerase/dehydratase
• Protein accession: YP_002370867
• Protein GI: 218245496
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0451] Nucleoside-diphosphate-sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTC TGGTTATTGG CGGTGACGGT TATTGCGGTT GGGCAACCGC CCTCTATCTT 
TCCAACAAAG GCTATGAAGT TGGGATTCTC GATAATTTAA GTCGGCGATA TTGGGATAGT 
CAACTAGGGG TAGATACCCT AACTCCCATT GCCCCTATTC AAAAGCGTAT CCAACGCTGG 
AAGGATCTGA CAGGCAATAA TATTGATCTG TTTGTTGGCG ATATTACGGA TTATAGTTTT 
TTAAGTCAAG CTATACGTCA GTTTGAACCC GGGGCGATCG TTCATTTCGG AGAACAGCGA 
TCGGCTCCCT ATTCAATGAT AGATCGAGAA CACGCTGTTT TTACCCAAGT TAACAACGTG 
GTAGGAACCC TGAACATTCT TTATGCGATG AAAGAAGACT TCCCCGACTG TCACCTCGTC 
AAACTGGGGA CAATGGGAGA ATATGGAACT CCCAACATCG ATATCGAAGA AGGGTACATC 
ACTATTGAAC ACAATGGACG CAAAGATACC TTACCCTATC CTAAACAACC GGGTAGTTTC 
TATCACTTGA GTAAAGTCCA CGATAGCCAC AATATCCATT TTGCGTGCAA AATTTGGGGT 
CTACGGGCAA CCGATTTGAA CCAAGGGGTG GTTTACGGGG TACTCACCGA TGAGACGGGG 
ATGGATGAGA TGTTAATCAA CCGTCTCGAC TACGATGGAG TTTTCGGAAC CGCGTTAAAC 
CGTTTTTGTA TTCAAGCTGC CATTGGACAT CCTTTAACCG TGTACGGTAA AGGGGGACAA 
ACCAGAGGCT TTTTGGATAT TCGGGATACG GTACGATGTA TCGAAATTGC GATCAATAAC 
CCGGCTGAAT CAGGTAAATT CCGAGTCTTT AACCAGTTTA CCGAATTGTT TAGTATTGAG 
GATTTAGCCC TAATGGTGAA AAAAGCGGGT AATTCTTTGG GATTGAATGT TGAAATCAAT 
CACTTAGAAA ATCCTCGCAT TGAGTTAGAA GAACACTACT TCAACGCTAA AAATACTAAT 
TTACTCGATT TAGGATTACA ACCTCACTAT CTATCTGATT CTCTCCTCGA TTCTTTATTG 
AATTTTGCTG AGAAGTACAA AGATCGTGTT GATCAAGAAC AAATTTTACC CAAGGTATCT 
TGGCGTAGAA GCTAA 

 

Protein sequence

MKVLVIGGDG YCGWATALYL SNKGYEVGIL DNLSRRYWDS QLGVDTLTPI APIQKRIQRW 
KDLTGNNIDL FVGDITDYSF LSQAIRQFEP GAIVHFGEQR SAPYSMIDRE HAVFTQVNNV 
VGTLNILYAM KEDFPDCHLV KLGTMGEYGT PNIDIEEGYI TIEHNGRKDT LPYPKQPGSF 
YHLSKVHDSH NIHFACKIWG LRATDLNQGV VYGVLTDETG MDEMLINRLD YDGVFGTALN 
RFCIQAAIGH PLTVYGKGGQ TRGFLDIRDT VRCIEIAINN PAESGKFRVF NQFTELFSIE 
DLALMVKKAG NSLGLNVEIN HLENPRIELE EHYFNAKNTN LLDLGLQPHY LSDSLLDSLL 
NFAEKYKDRV DQEQILPKVS WRRS