| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0527 |
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| Symbol | |
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| ID | 7102553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | - |
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| Start bp | 544845 |
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| End bp | 546575 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643473631 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002370774 |
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| Protein GI | 218245403 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAA GTAATGGAAA TGAGAATAAG GGAGCGATTG TTCCCCAAAA TGGAGCGAAT
GGCCATAACG CCCTGACAAA ATCTGAAGGC AACGACCATC TCTTTGGTCA AAACTTCCTT
GTCCCCATCA ATTCTGAACA AGCGGTGATT CTGCGTCAAT CTCCCATTTG GTCACGCGCC
GTAGTTTGGA CAATTGTGGG AGTAACAACG GCCTCGGTCA TTTGGGCTGC CGTGGCCACC
ATTGAACAAG TGGTCACAGC CAAAGGACAA CTTAAACCCC AAGACACCGT CAAGGAAATT
CAAGCTCCTC TCAATGGCGT GGTTGAAGAG GTTTTAGTTA AAGATGGCGA TCGCGTTAAA
AAAGGACAAG TTCTCGTATC GATGGATTCT GAGTCTACTA AAGCCGAATT AGTCTCCTTA
ACCAAAGTTA AACAATCTTT GCAACAAGAG AACAAATTTT ATCGCACGTT GATGAATCAG
TCGCTTGATC CGCTTCAAGT GCAAACCGAG ATAATCAAGC TGAAACTCCC CCCAGAAGTG
GCTGCTTTAG CCCTTAACCG TACTAGCTTA ATCGTTGAAA ATCAACTTTA TGGGATTCAA
TTAGGAGAAT CTAGTGCAGG GAGTGAACTG AGTCTCGATC AAGTGGCTCG ACTTCGAGCA
GCCAAAGCCG AATTAGATTC AAGGGCGATG GCTGCTCAAT TGGAAATGGA ACAACTTGAG
AAACAATTGC GACAAACCCA AGTACAGTTA GCGGATGCCA AAAAGCAATT AACTGATGAT
CAAAAAGTCT TAGCGGAAAT TCAACAACGC AATACAGAAG CTAGAGCAGA AGCCCAAAAG
GCGTTAAAAA TTGAAGAAGG AATCCTAAAA AATGTAGAAC CGTTATTAGA AGAAGGCGCT
CTTGCTCAAT TGCAAGTTGA AAAACAAAAA CAAGCGATTG CTGAAAGAAG ACAACGCCTC
ACCGAACAGA TTGCTAACGG AACTATTGAA TACGATAAAC AACGACAACA AATTCAGGAT
CGCACGGCTG AGATTGCTCG TTTTGAACAA GAAGAACGAC GCTTAGAATT AGCTATTGCT
CAAGCGAATG CTAAGTTAAA TAATACTGTT GTTCTTACGG AAAAAGAAGT GCGAGATAAA
ATTTCACAAA ACAAACAAAG AATCGCTGAT ATTGATAGCC AGTTAACCAA AATCATTGTA
GAAAATGACA AGAAAATTGC TGAAACTGAC AGCGAAATTA GTCGTACTAA TGTCACTTTA
AAGTATCAAG AAATTAAAGC TCCTGTTAGT GGAACTGTCT TTGATTTAAA AGCTACTACT
GGTTATGTTC CTCCTCCGAA TCAAACAGAA CCTTTATTAA AAATTGTGCC GGATGATCAG
CTAGTAGCTG AAGTTGATGT CACCAATGAA GATATTGGGT TTGTTCGGAC TGGACAAAAA
GCAGATATCC GCATTGATTC TTTTCCCTTT AGTGAATTTG GAGATATTAA AGGCGAAGTC
ATTGCCATTG GTTCAGATGC CTTAGAACCT AATGAAATTC ATAAATATTA TCGCTTTCCA
ACTAAAATTA AGTTAGATGA ACAAGTCCTA AGATCATCGG GTCGGGAAAT TCCTCTACAG
TCTGGAATGT CGGTTAGTGT TAACATTAAA GTCCGAGAAA ATCGAACTGT ATTGAGTTTA
GCAACTGAAT TGTTTACTAA GAAAGTTGAA AGTCTTAAAC AAGTCCGTTA G
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| Protein sequence | MSQSNGNENK GAIVPQNGAN GHNALTKSEG NDHLFGQNFL VPINSEQAVI LRQSPIWSRA
VVWTIVGVTT ASVIWAAVAT IEQVVTAKGQ LKPQDTVKEI QAPLNGVVEE VLVKDGDRVK
KGQVLVSMDS ESTKAELVSL TKVKQSLQQE NKFYRTLMNQ SLDPLQVQTE IIKLKLPPEV
AALALNRTSL IVENQLYGIQ LGESSAGSEL SLDQVARLRA AKAELDSRAM AAQLEMEQLE
KQLRQTQVQL ADAKKQLTDD QKVLAEIQQR NTEARAEAQK ALKIEEGILK NVEPLLEEGA
LAQLQVEKQK QAIAERRQRL TEQIANGTIE YDKQRQQIQD RTAEIARFEQ EERRLELAIA
QANAKLNNTV VLTEKEVRDK ISQNKQRIAD IDSQLTKIIV ENDKKIAETD SEISRTNVTL
KYQEIKAPVS GTVFDLKATT GYVPPPNQTE PLLKIVPDDQ LVAEVDVTNE DIGFVRTGQK
ADIRIDSFPF SEFGDIKGEV IAIGSDALEP NEIHKYYRFP TKIKLDEQVL RSSGREIPLQ
SGMSVSVNIK VRENRTVLSL ATELFTKKVE SLKQVR
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