Gene PCC8801_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0506 
Symbol 
ID7101969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp516921 
End bp517730 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content35% 
IMG OID643473610 
ProductCRISPR-associated Cas5e family protein 
Protein accessionYP_002370753 
Protein GI218245382 
COG category[S] Function unknown 
COG ID[COG5551] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCAGG ATATATTGCC TCAGCTTCAT AAATACCAAT TGCAATCTTT AGTCATTGAA 
TTGGGAGTAG CAAAACAAGG AAAACTACCA GCAACATTAA GTAGAGCCAT TCATGCTTGT
GTATTAAATT GGTTGAGTTT GGCTGATTCT CAATTAGCAA ATCAAATCCA TGACAGTCAA
ATATCTCCCC TTTGTCTATC TGGTTTAATA GGTAATCGTC GTCAACCGTA TTCTTTACTA
GGAGATTATT TTTTACTACG CATTGGTGTT TTACAACCTA GTTTAATTAA ACCTCTTTTA
AAAGGAATTG AGGCACAAGA AACACAAACA TTAGAACTCG GTAAATTTCC TTTTATCATT
CGTCAGGTTT ATAGTATGCC CCAAAGTCAT AAACTTAGTC AATTGACAGA TTATTATTCC
CTTGCTCTTT ATTCTCCTAC AATGACTGAG ATTCAACTAA AGTTTTTATC CCCTACCAGT
TTTAAGCAAA TACAAGGTGT TCAACCATTT CCTTTGCCTG AATTAGTATT TAATAGCTTA
CTCAGAAAAT GGAATCATTT TGCACCACAA GAATTAAAGT TTCCAGAAAT TCAATGGCAG
AGTTTTGTCT CTGCTTTTGA ACTAAAAACC CATGCGTTAA AAATGGAAGG AGGTGCAGAA
ATAGGCAGTC AAGGATGGGT TAAATATTGT TTTAAAGACA CCGAACAAGC TCGCATTGCT
TCTATTTTAT CTCACTTTGC TTTCTATGCT GGTGTGGGAC GTAAAACCAC TATGGGAATG
GGACAAACTC AGTTATTAGT AAACACTTAA
 
Protein sequence
MVQDILPQLH KYQLQSLVIE LGVAKQGKLP ATLSRAIHAC VLNWLSLADS QLANQIHDSQ 
ISPLCLSGLI GNRRQPYSLL GDYFLLRIGV LQPSLIKPLL KGIEAQETQT LELGKFPFII
RQVYSMPQSH KLSQLTDYYS LALYSPTMTE IQLKFLSPTS FKQIQGVQPF PLPELVFNSL
LRKWNHFAPQ ELKFPEIQWQ SFVSAFELKT HALKMEGGAE IGSQGWVKYC FKDTEQARIA
SILSHFAFYA GVGRKTTMGM GQTQLLVNT