Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_0502 |
Symbol | |
ID | 7101966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 513138 |
End bp | 513950 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643473606 |
Product | Squalene/phytoene synthase |
Protein accession | YP_002370749 |
Protein GI | 218245378 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAC GTAATAATGC CCTGAAGATT CTTAAAGAAA CGAGTCGAAC GTTTTATATC CCCATTAGTC GTCTTCCTGA TCGGTTGCAA GAGGCTGTCG CTTCTGCTTA TCTGTGTATG CGGGCGATCG ATGAAGTGGA AGATCATCCT GACTTGGACA ACTTTACCAA AGCCCAACTC TTGCGCCGTA TGAGTCTTAA TCTCCAGGCA GGAAGCGAAA AGGCCAGGGT AGAGGATTTT TCAGCCGGAT TAATGCCTTA TAATGCCTGT TTACCAGATG TCACTCTACG GGTAGGAGAA TGGGCATTAC TCGCTCCTGA TAGCATTGCT CCCCGTATCT GGGATGCCAC AGCAGCCATG GCCGATCGCA TGGCCTACTG GGCAGAAAAT AATTGGACGA TTCGCACTGA GGCTCATCTA GATCAATATA CCTTTAGTGT AGCGGGGGCT GTGGGTTTAT TGCTATCGGA TTTGTGGGCT TGGTATGATG GAACTCAAAC TAACCGAAGC TATGCTATTG GCTTTGGTCG CGGGTTACAA GCAGTTAATA TTGTTCGTAA TCACCGTGAA GATCTGCGCC GTGGGGTCAA TTTCTTACCC CAAGGATGGA ACGAACAAGA TGTCCACCAG TATGCCCGTC GTAACCTCAA GTTAGCTGAT CTCTATACTA AGTCTCTGCC CTCTGGACCT GCTTTGGATT TTTGCAAAAT TCCTTTAGCT TTGGCCTATG GAACTCTAGA AGTAATGGCT TTAGGAAAAG AAAAGCTGAG TCGGAGTGAT GTTATTGCGT TAGTCCAGCG AGTCACTCGC TAA
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Protein sequence | MNLRNNALKI LKETSRTFYI PISRLPDRLQ EAVASAYLCM RAIDEVEDHP DLDNFTKAQL LRRMSLNLQA GSEKARVEDF SAGLMPYNAC LPDVTLRVGE WALLAPDSIA PRIWDATAAM ADRMAYWAEN NWTIRTEAHL DQYTFSVAGA VGLLLSDLWA WYDGTQTNRS YAIGFGRGLQ AVNIVRNHRE DLRRGVNFLP QGWNEQDVHQ YARRNLKLAD LYTKSLPSGP ALDFCKIPLA LAYGTLEVMA LGKEKLSRSD VIALVQRVTR
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