Gene PCC8801_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0478 
Symbol 
ID7101948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp488640 
End bp489530 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content41% 
IMG OID643473587 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002370730 
Protein GI218245359 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA AAATCTTAGT TACGGGAATC GATGGACAGG TAGGGCAAGA GTTGAAAAAG 
ACGCTTAACC CATTAGGAGA AGTGATCGGA GTCAACCGTC AAACAATAGA CTTGACTAAA 
CCTGATCGCC TTCGTCAACT AATCCAAGAA ATTCACCCTA ATATTATCAT CAATGGGGCT 
GCTTATACGG CAGTTGACCA AGCAGAAAAA GAACCCGAAC TTGCCTTAGC GGTTAACGGA 
ATTGCACCAA CAATTATCGC AGAAGAAGCC CATAAATTAG GGGCGTTTCT CCTGCACATT 
TCTACTGATT ATGTTTTTGA TGGTACAAAA AATATTCCCT ACACCGAAGA AGATCCTACC 
CATCCCCTAA GTGTTTATGG ACAAAGTAAA CTCGCTGGAG AACAAGGAAT CCAGAAACAC 
AGCGATCGCT ATGTTATTTT ACGAACAGCA TGGGTTTATG GAAGCTATGG CAAGAGCAAT 
TTTGTCAAAA CCATGCTACG CTTAGGCCAG GAACGAGAGC AAATTAGGGT AGTGTCTGAT 
CAAATTGGTA GCCCTACTTG GGCACAAGAT ATTGCTCAGA CAATTAACCA ATTACTATTG 
ACCTTAGACC TAAAAAATAC TGCCGAAATT TATCATTTTA CCAATAGTGG GGTTGCTAGT 
TGGTATGACT TCGCTGTAAC CATTTTTGAA GAAGCTCAAA ACATTGGGTT TCCTTTGAAA 
GTTCAACAAG TAGATCCTAT TACCACTGCC GATTATCCTA CCCCCGCTAA ACGCCCCTCC 
TCTTCGGTTC TTTCAGGACA AAAAATAACA GCTACTCTCG GAAAATATGC TCCCTATTGG 
CGCAATTCTC TTAAACAAAT GCTGACTCAA TTATACCAAA AAACACCATG A
 
Protein sequence
MSKKILVTGI DGQVGQELKK TLNPLGEVIG VNRQTIDLTK PDRLRQLIQE IHPNIIINGA 
AYTAVDQAEK EPELALAVNG IAPTIIAEEA HKLGAFLLHI STDYVFDGTK NIPYTEEDPT 
HPLSVYGQSK LAGEQGIQKH SDRYVILRTA WVYGSYGKSN FVKTMLRLGQ EREQIRVVSD 
QIGSPTWAQD IAQTINQLLL TLDLKNTAEI YHFTNSGVAS WYDFAVTIFE EAQNIGFPLK 
VQQVDPITTA DYPTPAKRPS SSVLSGQKIT ATLGKYAPYW RNSLKQMLTQ LYQKTP