| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0429 |
|---|
| Symbol | |
|---|
| ID | 7105809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 432399 |
|---|
| End bp | 435680 |
|---|
| Gene Length | 3282 bp |
|---|
| Protein Length | 1093 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643473539 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_002370682 |
|---|
| Protein GI | 218245311 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2202] FOG: PAS/PAC domain
[COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTATT TCTTGGTTTA TTTTCTGTTT TATGGTGATG TTATATTGGG CAATGGGCAA
AATTCTTTAA TTACGCTTCA CTTAACTTCT GATATTTTAA TTACCATAGC CTATTATTGT
GTTGCCTCAA CACTGATTTA TTTGAGCCGA AAATGTCCTG ATTTTTCTTA TCAATCGATA
GGACTTTTAT TGAGTATCTT TCTTATCATC TGTGGGACAA TTCATTTGAT AGAAATAGCA
ACGCTTTGGC ATCCAAATAA TGGGCTATTT GCTATTATTA AATCCTTGGC TGCCTTATTA
TCAATTTATA TTGCTATCAA TCTCATTTTC TTGATCTCTA AAACTAAATA TCTAGACATA
AAAACCGTTA TAGAAACTTC CCAAGCACGT CTAGAGGGGA TTTTAAATAT AGCAGAAGAT
GCCATCATTT GTATTAATCA TAACCAACAG ATTACCCTAT TTAATCAAGG AGCAGAAAAA
ATCTTTGGTT GGAAGGCTTT AGATATCCTT GGTAAACCGT TATATTATCT TTTACCTAAG
CGTTTTGTCT CAGAACATCA ACAGTACGTT AAAGAGTTCA GTGAATCCGA TCATATCCCC
AGAAAAATGA GTCCCCATCG AGAAATTTTT GGGTTACGGC GAGATGGAAC CGAGTTTCCC
GCAGAAGCAT CGATCTCTCA GTTAAAACTA CCTAACGAAA CGATTTTTAC AGTTATTTTA
CGCGACATTA GTCAGCGTAA ACAAGCAGAC AAATTGTTTA AAGAACACGA AGAACGATTT
CGCAAGGTGT TTGAAGAAGG ACCATTAGGA ATGGCAATTG TAGGGTTAGA TTATCGGTTT
ATTAATGTTA ATCATACTCT CTGTCAAATG TTAGGCTATT CTGAGTCAGA ATTACTTGCG
TTAACCTTTG TTGAGGTTAC TCATCCCGAT GATATTGATA AGGATATACA GTTAGCAGAA
CAATTATACA ATCAAGAAAT TCCCTATTAT TCTCTAGAGA AACGATACAT TACTAAAAAT
GGTCAGATCC TTTGGGTTAT GCTGACAGCA GCTTGCTTGC GAGATGAACA AGGAAAGCTC
CGTTATGGGT TTGCTATGGT TGAAAATATT AACTCTCGTA AACAATCAGA AGCTCGATTA
AAGCAATATG AACATATTGT TTCAGCTACT AGCGATGCAG TAATTTTATT AGATCGTGAC
TATACTTATC AACTGGCTAA CCAAGCTTAT CTAAACTTGC ATCAAAAGAC CTCAGAAGAA
GTTATCGGAC ACCGTGTTTC AGAAATTTTA GGAGAGAAAG TCTTTCAAAC CCAAGTTAAA
CCCTTTGTTG ATCGAACTTT TTTAGGAGAA CCTCTAAAAT CTCAAGATTG GTTTGAGTTA
CCCCTTTTAG GAAGACAATT TATTAGCGCT AATTTTTTCC CCTACGTTGA AGCAGATCAC
AATATTTCTG GTGTTGTTAT TAGTCTTCGC AACGTGACAG ATCTTAAACA AATTGAAGAA
TCTTTACGGG AAAATAAGCT CAAGTTTCGT CAATTAATCG ACAATGTAAG AGATGTTTTA
TATATCCATG ATACCCAAAC CTATCAGTTA CTCTATCTGA GTCCTGCGTT TGAGAAAATT
TGGGGGATTC CTTGTGCGAA AGTCTATGAA AATCCCTATG CTTGGATTGA TAGCATTCAC
CCTGATGATC GTGAAAGTGT GACCATTGCC TTTGATAAAC AGATGATGAG TGGGACTAAG
TTTGATGAAG AATATCGCAT TATTCGTCCC AATGGAGAAA TTCGTTGGAT TTGGTCACGA
AGTTTTCCCG TTCTTGATGA ATCGGGTAAC ATCTATCGTA TGGCAGGAAT TGCTGAAGAT
ATTACTGAGC GTAAAGCCAT CCAAAAAACC CTAGAATTAC AAGATGTCAT CGTCAAAAAT
ATGGCAGAAG GGGTTTGTTT AGTCAGTGCT AGTAATGGGG AACTTGTTTA TTCTAATCCG
AAGTTTGAAC GGATGTTTGG CTATGAAATT GGAGAATTAA AAGGGAAGCA CGTTTCGATT
GTTAATTATG AAGATGAGAG CCAAAGTGCT GAAGATGTTA ATCAAGAAAT TAGACATCAT
GTGTTAGCAA AAGGAGAATA TACTTATGAA GTCTATAATG TCAAAAAAGA TGGTACTCCC
TTTTGGTGTC GTGCCACTAC CAGTTGTTTT GATCATCCGG ATTATGGTAA AGTATTAGTA
GCAGTACAAG AGGATATTGA TGATCGCAAG CAAACAGAAG AAGCATTAAT AGCAAGCGAG
CAACGACTTC AATATCTGAT TAGTTCTTCT CCAGTCGTTA TTTTTAGTTG TAAATCCGAT
GGCAATTTTG AAGCAACCTA TGTGAGTGAG AATGTGATCA ATGTTTTAGG TTATAGCAGT
CAAGTATTTT TAGATGACTC TCGCTTTTGG ATTGATCACA TTCATCCTGA TGATTTAGAA
GGGGTTCTTT TGAATCTTCC AACTATATTT ACCAGGGAAT TACACTCCCA TGAATTTCGT
TTTTTACGCA GCGATGGTAC TTATTGTTGG CTATTTGAAC AGATCCGTCT GATGCGTGAT
TCCAAGGGAA AACCCAAAGA AATTTTAGGC TATTTAGTCG ATATTAGCGA TCGCAAGGAA
GCCGAACAAA AAATCGCCGC ATCTCTCCAA GAAAAAGAGG TATTACTCAG AGAAATTCAT
CATCGAGTTA AAAATAATTT ACAAGTAATT TGTAGTCTAC TTAATTTACA ATCTCGTTCT
GTTCAAGATG GCAGTATTAA GGAACTTTTA CAGGAAAGTC GAAACCGAGT TAGATCCATG
TCTTTAGTGC ATGAAAAACT TTATCGATCT GAAAATATCG CTAGTATTAA TTTGGCTGAC
TATATTAATG ACTTAGTTAA TAATTTACTC AATTCTTACA AAACTATTTC AACCAAAATA
ACTTTAAAAG CTAACATTGA TCCCAGAATT TCTTTAAACA TTGATGCGGC TGTTCCCTGT
GGTTTAATTG TCAATGAATT AATTTCTAAT GCCTATAAAT ACGCTTTTAG TATAGGAGAT
CAAGGAGAAA TTTTGTTAAA AGCGATGATC AATAACAATC AAGAACTGGT TTTAACCGTC
ACAGATAATG GCAAAGGATT GCCGAAGGAC TTTGATTTAG ATCAAGTAAA AACCTTAGGG
TTACAATTAG TAAAAAGCTT AACCAATCAA CTGAGAGGAA AAATTACCAT TAATAGCAAG
GGAGGTACAC AGTTTGAAAT TATTTTAACA AGAATTCATT AA
|
|---|
| Protein sequence | MVYFLVYFLF YGDVILGNGQ NSLITLHLTS DILITIAYYC VASTLIYLSR KCPDFSYQSI
GLLLSIFLII CGTIHLIEIA TLWHPNNGLF AIIKSLAALL SIYIAINLIF LISKTKYLDI
KTVIETSQAR LEGILNIAED AIICINHNQQ ITLFNQGAEK IFGWKALDIL GKPLYYLLPK
RFVSEHQQYV KEFSESDHIP RKMSPHREIF GLRRDGTEFP AEASISQLKL PNETIFTVIL
RDISQRKQAD KLFKEHEERF RKVFEEGPLG MAIVGLDYRF INVNHTLCQM LGYSESELLA
LTFVEVTHPD DIDKDIQLAE QLYNQEIPYY SLEKRYITKN GQILWVMLTA ACLRDEQGKL
RYGFAMVENI NSRKQSEARL KQYEHIVSAT SDAVILLDRD YTYQLANQAY LNLHQKTSEE
VIGHRVSEIL GEKVFQTQVK PFVDRTFLGE PLKSQDWFEL PLLGRQFISA NFFPYVEADH
NISGVVISLR NVTDLKQIEE SLRENKLKFR QLIDNVRDVL YIHDTQTYQL LYLSPAFEKI
WGIPCAKVYE NPYAWIDSIH PDDRESVTIA FDKQMMSGTK FDEEYRIIRP NGEIRWIWSR
SFPVLDESGN IYRMAGIAED ITERKAIQKT LELQDVIVKN MAEGVCLVSA SNGELVYSNP
KFERMFGYEI GELKGKHVSI VNYEDESQSA EDVNQEIRHH VLAKGEYTYE VYNVKKDGTP
FWCRATTSCF DHPDYGKVLV AVQEDIDDRK QTEEALIASE QRLQYLISSS PVVIFSCKSD
GNFEATYVSE NVINVLGYSS QVFLDDSRFW IDHIHPDDLE GVLLNLPTIF TRELHSHEFR
FLRSDGTYCW LFEQIRLMRD SKGKPKEILG YLVDISDRKE AEQKIAASLQ EKEVLLREIH
HRVKNNLQVI CSLLNLQSRS VQDGSIKELL QESRNRVRSM SLVHEKLYRS ENIASINLAD
YINDLVNNLL NSYKTISTKI TLKANIDPRI SLNIDAAVPC GLIVNELISN AYKYAFSIGD
QGEILLKAMI NNNQELVLTV TDNGKGLPKD FDLDQVKTLG LQLVKSLTNQ LRGKITINSK
GGTQFEIILT RIH
|
|---|
| |