| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0352 |
|---|
| Symbol | |
|---|
| ID | 7104068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 344304 |
|---|
| End bp | 345767 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643473461 |
|---|
| Product | Carotenoid oxygenase |
|---|
| Protein accession | YP_002370606 |
|---|
| Protein GI | 218245235 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAA GAAAGTTTTT AATTCAATCT TCTCTGGCTG CCGTTGCTGC GATTACTTGG
GATCATTTAC CCAGTCAATC CACTCCTGTT TATAAGCATT ATAAGCATTA TAAAAGCTGG
AAAAGTGATA ATAGTTTTCT CAAAGGAATT AATGAACCTG TTTTTGCTGA AATCGAGCTT
GATAACTTAA AAATATCAGG AACAATTCCT CAGCAATTAC AAGGAATGTA CGTCCGTAAC
GGACCCAATC CTATGTTTAA ACCTACCTCC TATAACTATC CCCTAGAAGG GGATGGAATG
GTTCATGGAA TGTATTTTGA TCAAGGAAAA ATTGGCTACA AAAATCGCTG GATACAAACC
CGTGGACTAG CTTATGAAAG GTTTGAAGGC AAGGAACTAG CTGAATTAAA ATTTAAAAAC
TATGCAAATA CTAATATTAT TGGCTACGGG GATAAACTTT TAGCTTTATA TGAAGTGGGT
TTACCCTATC AAATGGATAA AAATTTAGAA ACCATTGGAG AATGGAATTT CCAAGGAAAA
TTAGAACAGT CAATGACAGC GCATCCGAAA TTTGATCCTG AAACGGGAGA ATTACACTTT
TATCAATATT CATTTTTTAA TACGCCCTAT TTGCATTATT ATATTGCCAA TCAAAAAGGA
GAGATAGTTA GAAAATCTCC CATTGAAATT GCGAATCCTG TGTTAATTCA TGATATGGTT
CTTACCAAGA ATTACGCCAT ATTTTTTGAC TGTCCTTTAG TCTTTAATAT GTCAAAAGCT
AAAGCGAATA AAACCCCTTT TATGTGGCAA CCCGAAGCAG GAACAAAGAT TATTTTAGTT
GATCGTCATA ATCCCAATAA AAAGCCGATT TATCTGAAAA CAGACGCTTT TTGGGTGTGG
CATTTCATGA ATGGATTTGA AGAAAACAAT AAAATTATTA TTGATTTTGT TTACTATCCT
AGTATTAACA TGGAAAGTCA TTGGCAAGCC ATGTTATCCA ATAAATCTAA CTTACAAAGA
ATAATTATTG ATCAAAAAAC ACATCAAATC GTCTCAGAGA AATTAGGAGA TCACTATGTT
GATTTTCCTA GCATCAATAC TCAAAAGCTA GGACAAACCT ATCGTTTTGG CTATACTCCT
CTGATTGATA CTGAATTATT ATCTCAGAAA AAAAGTCCGA ACTATTTCCC TTCCTTAATT
CAATATGATG TCATGAATAA AACCCATAAA ATTCATCAAT TTAAACCAGG ATGCTACGGA
GGAGAACCCG TTTTTATTCC TAACCCTAAC TCCCAATCGG AGTTAGATGG TTATGTAGCC
ACTTTTGTTT ATAATGAAAA TACCAACACC AGTGATTTTG TAATGCTTGA TCCCGCTAAT
TTTGAAAGTG AACCCATTGC AACAGTTCAT TTGCCTGTTC GGGTTCCTAG TGGTTTTCAT
GGCAATTGGA TCACTGATAG CTAA
|
|---|
| Protein sequence | MNRRKFLIQS SLAAVAAITW DHLPSQSTPV YKHYKHYKSW KSDNSFLKGI NEPVFAEIEL
DNLKISGTIP QQLQGMYVRN GPNPMFKPTS YNYPLEGDGM VHGMYFDQGK IGYKNRWIQT
RGLAYERFEG KELAELKFKN YANTNIIGYG DKLLALYEVG LPYQMDKNLE TIGEWNFQGK
LEQSMTAHPK FDPETGELHF YQYSFFNTPY LHYYIANQKG EIVRKSPIEI ANPVLIHDMV
LTKNYAIFFD CPLVFNMSKA KANKTPFMWQ PEAGTKIILV DRHNPNKKPI YLKTDAFWVW
HFMNGFEENN KIIIDFVYYP SINMESHWQA MLSNKSNLQR IIIDQKTHQI VSEKLGDHYV
DFPSINTQKL GQTYRFGYTP LIDTELLSQK KSPNYFPSLI QYDVMNKTHK IHQFKPGCYG
GEPVFIPNPN SQSELDGYVA TFVYNENTNT SDFVMLDPAN FESEPIATVH LPVRVPSGFH
GNWITDS
|
|---|
| |