Gene PCC8801_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0228 
Symbol 
ID7105285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp220052 
End bp221002 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content47% 
IMG OID643473341 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002370487 
Protein GI218245116 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGTGG CGCAGTTTCA AATTGAGTGT ATAGAATCTA AGACTCAGAA AAATCAAAGT 
CAATATAGTA AGTTTGTCCT AGAACCTCTA GCGAGGGGTC AGGGAACCAC CGTCGGCAAC 
GCTTTACGAC GGGTGTTACT GGCTAACTTG CAAGGAGCCG CCGTCACAGC GATCCGGATT 
GCAGGGGTAA ATCACGAATT TGCTACCATT CCAGGGGTCA GAGAGGATGT CTTAGAAATC 
ATGTTAAACA TGAAAGAAAT CGTCCTAAAA AGCTATAGTG ATCAGGCGCA AATTGGCCGC 
CTGGTTGCCA CAAGTGCGGG GACGGTCACG GCAGCCAACT TTGAGTTACC CTCAGAAGTG 
GAAGTGGTTG ATCCAACCCA GTATGTGGCA ACGCTGACCG AAGGCTCGAA ATTAGAGATG 
GAGTTTCGGA TCGAAACAGG AACCGGGTAT AAAGGGGTTG AGCGAGGCAA AGATGACGGT 
ACATCCCTTG ACTTTCTAGA GATCGATGCC GTGTTTATGC CGGTGACTAA GGTCAATTAC 
ATCGTCGAGG ACATCAGGGG AGAACACGGG GAAGCCCAAG ATCGGCTAAT TTTGGAAATT 
TGGACGAATG GGAGTTTTAA TCCCAAGGAA GCCCTATCTG AAGCTGCTGA GATTGTGGTG 
GATTTGTTTA GTCCCCTGAA AGACCTGAAC CAGCTCGAAA CCACCACCCC TGACTATCAA 
GACGATGAGA ATCCGCAAAG TCAGATTCCC ATCGAAGAAT TACAGCTTTC GGTCAGGGCT 
TACAACTGTC TAAAACGGGC ACAAATTAAT ACAGTGGCCG ATTTATTAGA TTATAGCCAA 
GAAGATCTCT TGGAGATCAA AAACTTCGGT CAAAAATCGG CTGAAGAAGT GATCGAAGCT 
TTGCAAAAGC GGTTAGGCAT TACCCTACCC CAAGAAAAAG CGAAATCTTA A
 
Protein sequence
MVVAQFQIEC IESKTQKNQS QYSKFVLEPL ARGQGTTVGN ALRRVLLANL QGAAVTAIRI 
AGVNHEFATI PGVREDVLEI MLNMKEIVLK SYSDQAQIGR LVATSAGTVT AANFELPSEV 
EVVDPTQYVA TLTEGSKLEM EFRIETGTGY KGVERGKDDG TSLDFLEIDA VFMPVTKVNY 
IVEDIRGEHG EAQDRLILEI WTNGSFNPKE ALSEAAEIVV DLFSPLKDLN QLETTTPDYQ 
DDENPQSQIP IEELQLSVRA YNCLKRAQIN TVADLLDYSQ EDLLEIKNFG QKSAEEVIEA 
LQKRLGITLP QEKAKS