Gene PCC8801_0208 details

Gene Information

• Locus tag: PCC8801_0208
• Symbol: prfA
• ID: 7103544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 204371
• End bp: 205483
• Gene Length: 1113 bp
• Protein Length: 370 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643473322
• Product: peptide chain release factor 1
• Protein accession: YP_002370468
• Protein GI: 218245097
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAT CCTATCTATT AGAAAAATTA CAATCCGTTG ATCAAACCTA CCAAGAATTA 
ACCCATCGTT TAGCGGATCC TGATATCGCC ACCAATCCTG ACGAATTACA ACGAGTGGCC 
AGACTCCGTT CATCCTTAGA AGAAACGGTT CTAACCTATG ATAGCTGGAA ACAAACCCAA 
GAGGAATTAA TAGGAGCAAA ACAGATCCTC AAAGATGCGG GGGGAGATCC CGAAATGCGG 
GAAATGGCAG CCTTAGAAGT GGAGGAATTA GCAGAAAAGT TAGAAGAACT AGAGAAAAAA 
CTGAAAATTT TGCTATTACC CCGTGATCCC AACGATGATA AGAACATTAT GCTAGAAATT 
CGTGCCGGAA CTGGAGGCGA TGAAGCCAGT ATTTGGGCAG GGGATTTAGT CAGAATGTAC 
TCTCGTTATG CCGAATCCCA AAAATGGACG GTAAAGCTAG TCAGCGAGTC CTTAGCAGAT 
ATGGGAGGAT TTAAAGAAGC AATTCTCGAA ATTCAGGGCG ATCGCGTCTA TAGTAAGCTA 
AAATTTGAAG CCGGAGTCCA CCGGGTGCAA CGAGTCCCCG TAACCGAAGC CGGGGGACGA 
GTGCACACTT CAACCGCCAC AGTCGCTATT ATGCCAGAAG TCGATGACGT AGAAGTCCAG 
ATCGATGCCA AAGATATCGA AATTACCACC GCCCGTTCAG GGGGCGCAGG GGGACAAAAC 
GTCAACAAGG TAGAAACCGC AGTTGATTTG TTCTATAAAC CCCTAGGGAT TCGGATCTTT 
TGTACTGAAG AGCGATCGCA ATTACAAAAC CGCGAACGGG CGATGCAGAT TTTACGCGCT 
AAGTTGTATG ATTTGAAATT ACGAGAACAA CAAGATGCCG TCAGTTCCAT GCGAAAGTCT 
CAGGTAGGAA CTGGAGCGCG ATCAGAGAAA ATTCGGACTT ATAATTACAA GGATAATCGC 
GTTACCGATC ATCGTCTAGG ACAAAATTTT TCCTTAGCAG GGACACTTGA AGGCGATATT 
GAGGAGATTA TTCAATCATG TATTAGTCAA GATCAACAAG AACGCCTTGA AGAATTAGCA 
GCGTCTCCAG AAACCGCTAG CGCAATTAAT TAG 

 

Protein sequence

MAESYLLEKL QSVDQTYQEL THRLADPDIA TNPDELQRVA RLRSSLEETV LTYDSWKQTQ 
EELIGAKQIL KDAGGDPEMR EMAALEVEEL AEKLEELEKK LKILLLPRDP NDDKNIMLEI 
RAGTGGDEAS IWAGDLVRMY SRYAESQKWT VKLVSESLAD MGGFKEAILE IQGDRVYSKL 
KFEAGVHRVQ RVPVTEAGGR VHTSTATVAI MPEVDDVEVQ IDAKDIEITT ARSGGAGGQN 
VNKVETAVDL FYKPLGIRIF CTEERSQLQN RERAMQILRA KLYDLKLREQ QDAVSSMRKS 
QVGTGARSEK IRTYNYKDNR VTDHRLGQNF SLAGTLEGDI EEIIQSCISQ DQQERLEELA 
ASPETASAIN