Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_0154 |
Symbol | |
ID | 7104737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 157321 |
End bp | 158460 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643473268 |
Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
Protein accession | YP_002370415 |
Protein GI | 218245044 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAGG CTAATGACCT ACTAACCCTT ACAGAGCCTC AAATCGATTT ACCCTTCTTC ATCGATCCCG ATGAAGGCGA AGAAATAGAG CTAATGACTG ATGAGGCTCT TGACGAGGTA ATGGCTAACC CAGAAGGGAA AAAAACCCGA AAGCTTAGTG CTTCTCGCCG CCGCGATCCC AACAAGAAAA AGCCTTATAC AGAAGACTCC ATTCGGATTT ACCTCCAAGA AATCGGTCGC ATTCGACTAT TGCGCGCGGA AGAAGAGATT GAACTGGCGC GTAAAATTGC GGATTTACTG GAATTAGAGA GAATCCGCGA AAAAATGACC GAACACATGG GACGCTTCCC CACGGATCTC GAATGGTCAC AGGCGATCAA TATGGAGTGG CACGCTTTTC AGCGTCGTCT CTATCTGGGG CGCAAAGCCA AGGACAAAAT GGTCCATTCT AACCTGCGTC TAGTGGTTTC GATTGCCAAA AAATACATGA ATCGGGGGTT ATCTTTTCAA GATTTAATTC AAGAAGGTTC CCTGGGCTTA ATTCGGGCGG CTGAAAAGTT TGACCACGAA AAAGGGTATA AGTTTTCGAC TTACGCCACT TGGTGGATTC GTCAAGCCAT TACCAGAGCG ATCGCTGATC AATCCCGTAC GATTCGTCTC CCAGTACACC TGTACGAAAC CATCTCTCGG ATTAAGAAAA CCACCAAGAT TCTCTCCCAA GAGATGCGCC GAAAACCGAC AGAAGAGGAA ATTGCGACTC GCATGGAGAT GACCATCGAA AAGTTACGGT TTATTGCTAA ATCCGCCCAA TTACCCATAT CCCTTGAAAC CCCCATTGGT AAGGAAGAAG ATTCCCGCCT GGGGGATTTT ATTGAGGCTG ATGGGGAAAA CCCTGAAGAT GAGGTGTCGA AAAATCTCCT ACGCGAAGAT CTCGAAAATG TCCTCGATAC CCTTAGTCCA CGGGAACGGG ATGTGCTGCG GTTGCGGTAC GGGTTAGACG ATGGACGAAT GAAAACCCTC GAAGAAATTG GACAGATCTT TAATGTTACC CGTGAGAGAA TCCGTCAAAT TGAGGCTAAA GCACTACGAA AGCTCCGTCA TCCCAACCGC AATAGTATTC TTAAAGAATA CATTCGGTAA
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Protein sequence | MTQANDLLTL TEPQIDLPFF IDPDEGEEIE LMTDEALDEV MANPEGKKTR KLSASRRRDP NKKKPYTEDS IRIYLQEIGR IRLLRAEEEI ELARKIADLL ELERIREKMT EHMGRFPTDL EWSQAINMEW HAFQRRLYLG RKAKDKMVHS NLRLVVSIAK KYMNRGLSFQ DLIQEGSLGL IRAAEKFDHE KGYKFSTYAT WWIRQAITRA IADQSRTIRL PVHLYETISR IKKTTKILSQ EMRRKPTEEE IATRMEMTIE KLRFIAKSAQ LPISLETPIG KEEDSRLGDF IEADGENPED EVSKNLLRED LENVLDTLSP RERDVLRLRY GLDDGRMKTL EEIGQIFNVT RERIRQIEAK ALRKLRHPNR NSILKEYIR
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