Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_0040 |
Symbol | |
ID | 7103707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 40959 |
End bp | 42767 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643473156 |
Product | TrkA-C domain protein |
Protein accession | YP_002370303 |
Protein GI | 218244932 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTT TTCTCACGTT AGGCGTTGTT GTTATTGCGT TAATTTTGTT TATCACTGAG GTTTTTCCTG CTGATACAAC AGCTATTATT GTTGCTATTA CTTTGATGTT ACTAGGGTTA GTTACCCCCG ATGAAGGAAT AGCAGGATTT GGTAATTCTG CCACAATTAC CGTCATGGCA ATGTTTATTC TCAGTGCAGG AATTACTCGC TCAGGAGCTC TTCAGATGGT GCGAGATTGG TTAGTTAAGT GGGGAGGAAA AAACGCTAGT CAGCAAATTT TAGTCATGGG ATTAATCGTC GGTCCTATCA CCGCTTTTAT TAATAATACT GCCGTCGTTG CCATGTTCTT ACCGATGGTT GAAGAATGGA GTAAAAAACG CAATATCTCC CCATCCAAAT TATTAATGCC TCTGTCTTTT GTTACGGTTT TAGGAGGAAT GATAACCGTT GTCGGGACTT CAACAAATAT CTTGGCTAGT GGAATGTCTA AAAAGTTAGG CTATGGAGAA TTTAGCTTAT TTCAATTTAG CGCATTAGGG ATACTAACCT TTATTCTAGG GTTAGCCTAC TTAGTGATTG TTGCTCCCCG TCTTCTCCCT AATCGCAAAC CACCTGCAAG TAGCTTAATT AATGAAGATT ATGAACTGGA AGATTATGTT AGCGAAGTCA TTATTACTCC CCGTTCTAGT TTAGTTGGGA AAACCCTGAG AGAAAGTAAA ATTCAACGTA AATTTGATTT AGATGTTCTA GAAATTATCC ACAATGACAC CCATTTTCCC CAACCGTTAG CCGACAAAAT TCTCTCAGTA GGTGATATAT TATTAGTCAG AGGAAAACGA CAAGATTTAC TCAATATCAA AGACGAACAA GGGATAGAAA TTTTACCTGA TGTTAAATTT GGCAATAAAG CTCTTGAAAC CGAAATGAGT AGCGGAGAAG AAAAAGCAGC AGAAATTTTA ATCATGTCTA ATTCTCGGTT AATTGGTTCA ACCTTGAAAG AGTTACGCTT TCGTCAGCGT TATAATGCAA CGGTTTTAGC CATACGTCGA GGTGAGGAAT TAGTCAGAGA AAGACTCGGA AAAGTCCCCT TAAAATTTGG AGATGTCTTA TTAATACAAG GTCCCAAACA AAGCTTTATT GGGTTACAAA CCACACGAGA AATGCTAGTT TTAGAAGAGC GAGATATAGA AACCCTCAGA CAAGACAAAG CTTGGATATC CTTAGTCATT ATTATCGGCG TTATTCTCTT AGCTGCTTTT GATGTACTCG ACATTTTAGT GAGTAGTTTA GCAGGAGTCG TTGCCATGAT TCTAACCCGT TGTTTAAAAC CCGGAGAAAT CTATGGTTCA GTGCGTTGGG ATGTCATCTT TCTCTTAGCA GGATTAATTC CTTTAGGGAC TGCTATGGAT AAGTCCGGTG CTACCCAATG GTTAGCCAAT AATTTGATAC AATTAGGAGG AAATTTATCA GGATATTGGA TATTAACTTT TTTTGTGTTA ATCACCTCAT TACTAACAGA AATTCTGTCT AATAATGCCA CTGTTGTTCT CATGATTCCC ATCGCGGTTA AAGTCGCAGA GACTCTTAAT TATAATCCCT ACGCTTTTAT GTTTGCCGTT ACGTTTGCAG CTTCTAATAG CTTTATGACT CCTATTGGCT ATCAAACTAA TACTATGGTG TATACCCCAG GGGGTTATCG CTTTTTAGAT TTTACAAGGG TTGGTGCTCC TTTAAACCTT TTGATGTATA TTTTTGTACC CCTTATAATT CAATGGTTAT ATGGTATTCA GTTAGCCAGT CATCCCTAA
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Protein sequence | MQIFLTLGVV VIALILFITE VFPADTTAII VAITLMLLGL VTPDEGIAGF GNSATITVMA MFILSAGITR SGALQMVRDW LVKWGGKNAS QQILVMGLIV GPITAFINNT AVVAMFLPMV EEWSKKRNIS PSKLLMPLSF VTVLGGMITV VGTSTNILAS GMSKKLGYGE FSLFQFSALG ILTFILGLAY LVIVAPRLLP NRKPPASSLI NEDYELEDYV SEVIITPRSS LVGKTLRESK IQRKFDLDVL EIIHNDTHFP QPLADKILSV GDILLVRGKR QDLLNIKDEQ GIEILPDVKF GNKALETEMS SGEEKAAEIL IMSNSRLIGS TLKELRFRQR YNATVLAIRR GEELVRERLG KVPLKFGDVL LIQGPKQSFI GLQTTREMLV LEERDIETLR QDKAWISLVI IIGVILLAAF DVLDILVSSL AGVVAMILTR CLKPGEIYGS VRWDVIFLLA GLIPLGTAMD KSGATQWLAN NLIQLGGNLS GYWILTFFVL ITSLLTEILS NNATVVLMIP IAVKVAETLN YNPYAFMFAV TFAASNSFMT PIGYQTNTMV YTPGGYRFLD FTRVGAPLNL LMYIFVPLII QWLYGIQLAS HP
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