Gene PCC8801_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0040 
Symbol 
ID7103707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp40959 
End bp42767 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content38% 
IMG OID643473156 
ProductTrkA-C domain protein 
Protein accessionYP_002370303 
Protein GI218244932 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTT TTCTCACGTT AGGCGTTGTT GTTATTGCGT TAATTTTGTT TATCACTGAG 
GTTTTTCCTG CTGATACAAC AGCTATTATT GTTGCTATTA CTTTGATGTT ACTAGGGTTA
GTTACCCCCG ATGAAGGAAT AGCAGGATTT GGTAATTCTG CCACAATTAC CGTCATGGCA
ATGTTTATTC TCAGTGCAGG AATTACTCGC TCAGGAGCTC TTCAGATGGT GCGAGATTGG
TTAGTTAAGT GGGGAGGAAA AAACGCTAGT CAGCAAATTT TAGTCATGGG ATTAATCGTC
GGTCCTATCA CCGCTTTTAT TAATAATACT GCCGTCGTTG CCATGTTCTT ACCGATGGTT
GAAGAATGGA GTAAAAAACG CAATATCTCC CCATCCAAAT TATTAATGCC TCTGTCTTTT
GTTACGGTTT TAGGAGGAAT GATAACCGTT GTCGGGACTT CAACAAATAT CTTGGCTAGT
GGAATGTCTA AAAAGTTAGG CTATGGAGAA TTTAGCTTAT TTCAATTTAG CGCATTAGGG
ATACTAACCT TTATTCTAGG GTTAGCCTAC TTAGTGATTG TTGCTCCCCG TCTTCTCCCT
AATCGCAAAC CACCTGCAAG TAGCTTAATT AATGAAGATT ATGAACTGGA AGATTATGTT
AGCGAAGTCA TTATTACTCC CCGTTCTAGT TTAGTTGGGA AAACCCTGAG AGAAAGTAAA
ATTCAACGTA AATTTGATTT AGATGTTCTA GAAATTATCC ACAATGACAC CCATTTTCCC
CAACCGTTAG CCGACAAAAT TCTCTCAGTA GGTGATATAT TATTAGTCAG AGGAAAACGA
CAAGATTTAC TCAATATCAA AGACGAACAA GGGATAGAAA TTTTACCTGA TGTTAAATTT
GGCAATAAAG CTCTTGAAAC CGAAATGAGT AGCGGAGAAG AAAAAGCAGC AGAAATTTTA
ATCATGTCTA ATTCTCGGTT AATTGGTTCA ACCTTGAAAG AGTTACGCTT TCGTCAGCGT
TATAATGCAA CGGTTTTAGC CATACGTCGA GGTGAGGAAT TAGTCAGAGA AAGACTCGGA
AAAGTCCCCT TAAAATTTGG AGATGTCTTA TTAATACAAG GTCCCAAACA AAGCTTTATT
GGGTTACAAA CCACACGAGA AATGCTAGTT TTAGAAGAGC GAGATATAGA AACCCTCAGA
CAAGACAAAG CTTGGATATC CTTAGTCATT ATTATCGGCG TTATTCTCTT AGCTGCTTTT
GATGTACTCG ACATTTTAGT GAGTAGTTTA GCAGGAGTCG TTGCCATGAT TCTAACCCGT
TGTTTAAAAC CCGGAGAAAT CTATGGTTCA GTGCGTTGGG ATGTCATCTT TCTCTTAGCA
GGATTAATTC CTTTAGGGAC TGCTATGGAT AAGTCCGGTG CTACCCAATG GTTAGCCAAT
AATTTGATAC AATTAGGAGG AAATTTATCA GGATATTGGA TATTAACTTT TTTTGTGTTA
ATCACCTCAT TACTAACAGA AATTCTGTCT AATAATGCCA CTGTTGTTCT CATGATTCCC
ATCGCGGTTA AAGTCGCAGA GACTCTTAAT TATAATCCCT ACGCTTTTAT GTTTGCCGTT
ACGTTTGCAG CTTCTAATAG CTTTATGACT CCTATTGGCT ATCAAACTAA TACTATGGTG
TATACCCCAG GGGGTTATCG CTTTTTAGAT TTTACAAGGG TTGGTGCTCC TTTAAACCTT
TTGATGTATA TTTTTGTACC CCTTATAATT CAATGGTTAT ATGGTATTCA GTTAGCCAGT
CATCCCTAA
 
Protein sequence
MQIFLTLGVV VIALILFITE VFPADTTAII VAITLMLLGL VTPDEGIAGF GNSATITVMA 
MFILSAGITR SGALQMVRDW LVKWGGKNAS QQILVMGLIV GPITAFINNT AVVAMFLPMV
EEWSKKRNIS PSKLLMPLSF VTVLGGMITV VGTSTNILAS GMSKKLGYGE FSLFQFSALG
ILTFILGLAY LVIVAPRLLP NRKPPASSLI NEDYELEDYV SEVIITPRSS LVGKTLRESK
IQRKFDLDVL EIIHNDTHFP QPLADKILSV GDILLVRGKR QDLLNIKDEQ GIEILPDVKF
GNKALETEMS SGEEKAAEIL IMSNSRLIGS TLKELRFRQR YNATVLAIRR GEELVRERLG
KVPLKFGDVL LIQGPKQSFI GLQTTREMLV LEERDIETLR QDKAWISLVI IIGVILLAAF
DVLDILVSSL AGVVAMILTR CLKPGEIYGS VRWDVIFLLA GLIPLGTAMD KSGATQWLAN
NLIQLGGNLS GYWILTFFVL ITSLLTEILS NNATVVLMIP IAVKVAETLN YNPYAFMFAV
TFAASNSFMT PIGYQTNTMV YTPGGYRFLD FTRVGAPLNL LMYIFVPLII QWLYGIQLAS
HP