| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0038 |
|---|
| Symbol | |
|---|
| ID | 7103706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 38796 |
|---|
| End bp | 39962 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643473154 |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_002370301 |
|---|
| Protein GI | 218244930 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCC CAACCCTAAC TCCTCAATTA GCGCAACGAC TACGGGACTA TCTCCACAGT
CGTCAGGGGG AGATGATAGA ACTATTAGGA CAATTAGTTC AAGCGGAATC TCCCTCTACA
GTTCCAGAAT CACAAAAAAA CGTCTTATCC CTCCTGAAAC AGTCCCTAGA AGAGCGTAAC
TATCAGGTAC GGTATGTGAA GGGAAATCAA ACGGGAGGGC ATTTATTAGC CATTCCCCGC
GATCGCCCCA CAACCCAACC TCAACAACTT CTGTTAGGAC ATTGTGACAC TGTATGGCCT
GTAGGGACTC TCGAAACCAT GCCCCTTGTT CGTCATCAGG ACAAACTCTA TGGACCAGGA
GTTTATGACA TGAAAGGGGG ACTGGTGCAG GGAATTTTTG CCCTAGAAGC CTTACAAGCG
CAGGATTTAA CCTCCAGTAT CACCCCCATT TTTTTGATCA ACTCTGACGA AGAAATTGGT
AGTCAGGAAT CTACTCCTCA TATTCAAGCA CTGGCTCAAC AATGCGATCG CGTCTTTGTT
TTGGAGCCTT CTTTGGGAGC AACCGGACGA CTGAAAACGC AACGCAAGGG GGTGGGACGT
TTTACCATTC GGGTTGTAGG AAAAGCTGCC CATGCGGGGT TAGACCCCGA AAAAGGAGCT
AGTGCTATTC TTGAACTCTC CTTTGTTATT CAACAGCTAT TTGCTTTAAA TAACCCAGAA
CGGGGGATTA CTGTCAACGT CGGGATGATT GACGGGGGGA TTCGATCTAA CGTAGTTGCT
CCTGAAAGCG AGGCTGTTGT TGATGTGCGG GTGTTGCATC AAGAAGATGT TCAGGCCATT
GAAACAGCGA TTTTTGCCTT GAAACCGACT ACCCCTGGTA CTGAACTGAG GATTGAAGGA
CGAATCGGAC GAACCCCGAT GGAAAAAACC CCCGCGAGTG AACAACTGTG GCAAAAAGCC
CGTCAGATTG GGGCAGAATT GGGCATAGAG CTTGAAGAAG CAACGGCAGG GGGGGGATCG
GATGGTAATA CGACCAACCT CTATACGCCC ACTTTAGACG GGTTAGGGGC GATCGGCGAT
GCTGCCCATT CTCCAGGGGA ATTTATCTAT CTTGACAGTT TGGTTGAGCG ATCAGCTTTA
CTGGCTCGCT TATTGATTGA ACCTTAA
|
|---|
| Protein sequence | MSSPTLTPQL AQRLRDYLHS RQGEMIELLG QLVQAESPST VPESQKNVLS LLKQSLEERN
YQVRYVKGNQ TGGHLLAIPR DRPTTQPQQL LLGHCDTVWP VGTLETMPLV RHQDKLYGPG
VYDMKGGLVQ GIFALEALQA QDLTSSITPI FLINSDEEIG SQESTPHIQA LAQQCDRVFV
LEPSLGATGR LKTQRKGVGR FTIRVVGKAA HAGLDPEKGA SAILELSFVI QQLFALNNPE
RGITVNVGMI DGGIRSNVVA PESEAVVDVR VLHQEDVQAI ETAIFALKPT TPGTELRIEG
RIGRTPMEKT PASEQLWQKA RQIGAELGIE LEEATAGGGS DGNTTNLYTP TLDGLGAIGD
AAHSPGEFIY LDSLVERSAL LARLLIEP
|
|---|
| |