| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCB4264_A4199 |
|---|
| Symbol | xerD |
|---|
| ID | 7098832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus B4264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011725 |
|---|
| Strand | - |
|---|
| Start bp | 4100046 |
|---|
| End bp | 4100936 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643471714 |
|---|
| Product | site-specific tyrosine recombinase XerD |
|---|
| Protein accession | YP_002368894 |
|---|
| Protein GI | 218235095 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC
[TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00345142 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGATC AATTAAAAGA TTTTATTCAT TATATGGTTG TCGAAAAAGG ATTAGCAAAG
AATACAGTAG TATCTTATGA ACGGGATTTA AAAAGCTACG TAAAGTATTT GCAAAATGTG
GAACAGACGA AAACTTTTCA TGAAGTGACC CGTTTACACA TTGTTAACTT TTTGCAGTAT
TTAAAAGAGA ACGGAAAATC TTCGAAAACA TTGGCGCGTC ATATCGCATC AATTCGTTCG
TTCCACCAAT TTTTACTTCG TGAACGAGCG GTAGAACACG ACCCATCCGT ACATATTGAA
ACGCCACAAG GGGAACGGAA ATTACCAAAA GTATTATCAG TTGATGAAGT AGAGGCGTTA
CTTCAAACAC CAAAAATGAC AAGTGCTTTT GGTATTCGTG ATAAGGCGAT GCTAGAGTTA
CTGTATGCGA CAGGACTTCG TGTTTCAGAA TTGATTGCAC TCAATTTAGA AGATGTACAT
TTAACGATGG GATTTGTTCG TTGCATAGGG AAAGGGAATA AAGAAAGAAT TATTCCACTA
GGAAGTTTAG CAACGGAAGC GATTCAAAAG TATATTGAAA AAGGAAGAAG AGAATTAATG
GGGAAAAAAG TAGTAGATGC ACTCTTTTTA AACCATCATG GTAATCGATT ATCAAGACAA
GGATTTTGGA AAATATTAAA ACGATTAGCG AAAGAAGCAA ACATTGAAAA AGAGCTTACA
CCTCATACGT TGCGTCATTC GTTTGCTACG CACTTATTAG AAAATGGAGC AGATTTACGT
GCTGTACAAG AAATGCTTGG ACATGCAGAT ATTTCAACGA CGCAAATCTA TACGCACGTT
TCAAAAACTA GATTAAAAGA TGTATATAAA CAGTTTCATC CGAGAGCATA G
|
|---|
| Protein sequence | MEDQLKDFIH YMVVEKGLAK NTVVSYERDL KSYVKYLQNV EQTKTFHEVT RLHIVNFLQY
LKENGKSSKT LARHIASIRS FHQFLLRERA VEHDPSVHIE TPQGERKLPK VLSVDEVEAL
LQTPKMTSAF GIRDKAMLEL LYATGLRVSE LIALNLEDVH LTMGFVRCIG KGNKERIIPL
GSLATEAIQK YIEKGRRELM GKKVVDALFL NHHGNRLSRQ GFWKILKRLA KEANIEKELT
PHTLRHSFAT HLLENGADLR AVQEMLGHAD ISTTQIYTHV SKTRLKDVYK QFHPRA
|
|---|
| |