| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCB4264_A3487 |
|---|
| Symbol | amyS |
|---|
| ID | 7101359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus B4264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011725 |
|---|
| Strand | - |
|---|
| Start bp | 3366363 |
|---|
| End bp | 3367904 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643471011 |
|---|
| Product | cytoplasmic alpha-amylase |
|---|
| Protein accession | YP_002368191 |
|---|
| Protein GI | 218233306 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA GAATAACAAT AGTCGGATTG TCAGTTGTTA TGTTTTTACC TAGTATATAT
GAGGGGAGTA AGGCATATGC AGACACAGTT AACAATGGAA CGTTAATGCA GTATTTTGAG
TGGTATTCTC CGAATGATGG GAATCATTGG AATCGTTTGC GTACTGATGC TGAAAATTTA
GCGGAAAAAG GAATTACATC TGTTTGGATA CCACCTGCAT ATAAAGGAAC TACGCAAAAT
GACGTAGGAT ATGGAGCATA TGATTTATAT GATCTGGGGG AATTCAATCA AAAGGGCACA
GTGCGGACGA AATATGGGAC GAAAGCACAA TTGAAATCTG CAATTGACGC TTTACATAAG
AAAAACATCG ATGTATACGG TGATGTAGTT ATGAATCATA AAGGTGGGGC TGATTATACA
GAAACTGTCA CAGCAGTTGA GGTAGACCCG AGCAATCGAA ATAATGAAGT ATCAGGTGAT
TATGAAATTA GTGCGTGGAC GGGATTTAAC TTTCCAGGGC GTGGAGATTC TTATTCTAAT
TTCAAATGGA AATGGTATCA TTTTGACGGA ACGGATTGGG ATGAAGGAAG GAAATTAAAC
CGAATTTATA AATTTAGGGG CATAGGTAAA GCATGGGACT GGGAAGTATC TAGCGAGAAT
GGGAATTATG ATTATTTGAT GTATGCGGAT CTTGATTTTG ATCATCCAGA TGTTGCGAAT
GAAATGAAAA AATGGGGAAC GTGGTATGCG AATGAATTAA ATTTAGATGG TTTTCGTTTA
GATGCTGTTA AACATATTGA TCATGAATAT TTGCGTGATT GGGTAAATCA CGTTAGACAG
CAAACAGGGA AAGAAATGTT TACAGTAGCT GAATATTGGC AAAATGATAT CCAGACTTTA
AATAATTATT TAGCGAAGGT TAATTATAAT CAATCTGTGT TCGATGCACC ACTTCATTAT
AATTTTCATT ATGCTTCAAC AGGAAATGGA AATTATGATA TGAGAAATAT TTTAAAAGGA
ACGGTAGTTG CGAATCATCC TACACTTGCG GTTACTCTAG TTGAAAATCA TGATTCACAG
CCTGGTCAGT CATTGGAATC TGTAGTGAGC CCTTGGTTCA AACCGCTGGC ATATGCATTT
ATTTTAACGC GTGCAGAGGG GTATCCTTCT GTTTTCTATG GTGATTACTA TGGTACAAAA
GGAAATAGTA ACTATGAAAT TCCAGCGTTA AAGGACAAAA TTGATCCGAT TTTGACGGCA
CGAAAAAACT TTGCATATGG TACGCAACGT GATTATTTTG ATCATCCAGA TGTGATTGGC
TGGACAAGAG AAGGTGATAG TGTACATGCT AATTCTGGTT TAGCAACATT AATCTCTGAT
GGACCAGGAG GGGCGAAGTG GATGGATGTT GGAAAGAATA ACGCAGGGGA AGTATGGTAT
GATATTACGG GTAATCAAAC AAATACTGTA ACAATTAATA AGGACGGATG GGGGCAGTTC
CAAGTAAGTG GAGGATCAGT TTCCATATAT GTTCAACAAT AA
|
|---|
| Protein sequence | MFKRITIVGL SVVMFLPSIY EGSKAYADTV NNGTLMQYFE WYSPNDGNHW NRLRTDAENL
AEKGITSVWI PPAYKGTTQN DVGYGAYDLY DLGEFNQKGT VRTKYGTKAQ LKSAIDALHK
KNIDVYGDVV MNHKGGADYT ETVTAVEVDP SNRNNEVSGD YEISAWTGFN FPGRGDSYSN
FKWKWYHFDG TDWDEGRKLN RIYKFRGIGK AWDWEVSSEN GNYDYLMYAD LDFDHPDVAN
EMKKWGTWYA NELNLDGFRL DAVKHIDHEY LRDWVNHVRQ QTGKEMFTVA EYWQNDIQTL
NNYLAKVNYN QSVFDAPLHY NFHYASTGNG NYDMRNILKG TVVANHPTLA VTLVENHDSQ
PGQSLESVVS PWFKPLAYAF ILTRAEGYPS VFYGDYYGTK GNSNYEIPAL KDKIDPILTA
RKNFAYGTQR DYFDHPDVIG WTREGDSVHA NSGLATLISD GPGGAKWMDV GKNNAGEVWY
DITGNQTNTV TINKDGWGQF QVSGGSVSIY VQQ
|
|---|
| |