| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCB4264_A1204 |
|---|
| Symbol | rocD |
|---|
| ID | 7099763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus B4264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011725 |
|---|
| Strand | - |
|---|
| Start bp | 1170549 |
|---|
| End bp | 1171739 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643468754 |
|---|
| Product | ornithine--oxo-acid transaminase |
|---|
| Protein accession | YP_002365937 |
|---|
| Protein GI | 218233198 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.957107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAA CTAAGGATAT TATCGAACTT ACAGACACAT ACGGAGCAAA TAACTATCAC
CCACTTCCAA TCGTTATTTC TAAAGCAGAA GGTGTTTGGG TAGAAGATCC TGAAGGAAAC
CGCTATATGG ACTTATTAAG TGCATATTCT GCAGTAAACC AAGGTCATCG TCACCCGAAA
ATTATTAACG CTTTAATTGA CCAAGCTAAT CGTGTTACGT TAACTTCTCG TGCTTTCCAT
AGCGATCAAT TAGGTCCTTG GTACGAAAAA GTTGCGAAAC TAACTAATAA AGAAATGGTA
CTTCCAATGA ATACAGGTGC TGAAGCTGTT GAAACTGCAA TTAAAACAGT TCGTCGCTGG
GCTTATGATG TGAAGAAAGT AGAAGCAAAC CGCGCTGAAA TCATCGTTTG TGAAGATAAC
TTCCACGGAC GTACAATGGG TTCTGTTTCT ATGTCTTCAA ACGAAGAGTA CAAGCGTGGA
TTCGGTCCAA TGCTTCCTGG CATCGTTGTA ATTCCTTACG GTGATTTAGA AGCGTTAAAA
GCTGCAATTA CACCAAACAC AGCTGCATTC ATTTTAGAGC CAATTCAAGG TGAAGCAGGA
ATTAACATCC CACCAGCTGG TTACTTAAAA GAAGCTTTTG AAGTATGTAA AAAAGAAAAC
GTTTTATTTG TAGCAGATGA AATCCAAACT GGCTTAGGCC GCACTGGTAA AGTATTTGCT
TGTGACTGGG ACAATGTAAC TCCTGACATG TACATACTTG GTAAAGCACT TGGCGGCGGC
GTATTCCCGA TCTCTTGTGT TGCAGCAAAC CGCGATATTT TAGGTGTATT TGAGCCAGGT
TCTCACGGTT CTACATTCGG TGGTAACCCA CTTGCATGTG CTGTTTCTAT CGCAGCTCTT
GAAGTGTTAG AAGAAGAAAA ATTAACAGAG CGTTCTCTTC AATTAGGAGA AAAATTAGTT
GGGCAATTAA AAGAGATTGA CAACCCAATG ATCACTGAAG TTCGCGGTAA AGGTTTATTC
ATCGGTATCG AATTAAACGA GCCAGCTCGT CCTTACTGTG AACAACTAAA AGCAGCTGGT
CTACTATGTA AAGAAACACA TGAAAACGTA ATTCGTATCG CACCACCTCT AGTAATCTCT
GAAGAAGATT TAGAGTGGGC ATTCCAAAAA ATTAAAGCTG TATTATCGTA A
|
|---|
| Protein sequence | MIQTKDIIEL TDTYGANNYH PLPIVISKAE GVWVEDPEGN RYMDLLSAYS AVNQGHRHPK
IINALIDQAN RVTLTSRAFH SDQLGPWYEK VAKLTNKEMV LPMNTGAEAV ETAIKTVRRW
AYDVKKVEAN RAEIIVCEDN FHGRTMGSVS MSSNEEYKRG FGPMLPGIVV IPYGDLEALK
AAITPNTAAF ILEPIQGEAG INIPPAGYLK EAFEVCKKEN VLFVADEIQT GLGRTGKVFA
CDWDNVTPDM YILGKALGGG VFPISCVAAN RDILGVFEPG SHGSTFGGNP LACAVSIAAL
EVLEEEKLTE RSLQLGEKLV GQLKEIDNPM ITEVRGKGLF IGIELNEPAR PYCEQLKAAG
LLCKETHENV IRIAPPLVIS EEDLEWAFQK IKAVLS
|
|---|
| |