| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCB4264_A0494 |
|---|
| Symbol | rocR1 |
|---|
| ID | 7101485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus B4264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011725 |
|---|
| Strand | - |
|---|
| Start bp | 479615 |
|---|
| End bp | 481018 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643468048 |
|---|
| Product | arginine utilization regulatory protein RocR |
|---|
| Protein accession | YP_002365272 |
|---|
| Protein GI | 218232595 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0207155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACAG AAGAAATTAA TTTAAAACAG ATCATTGAAA TGAATATGCT ATATGAAACT
TTACTCAATG AACTCGACAT CGGAATTCAT ATTATTAATG AGGAAAGTAA GACGATTATC
TATAACCGCA AAATGATGGA AATTGAATCA ATGGAGCGCT CAGATGTGCT ATATAAAAGT
CCTTTAGAAG TATTCGCATT TGAAGAAAAT AAAAATAGTA CTCTTATAGA GGCATTAAAA
TTTGGAAAAA CAAAGAAAAA TATAAAACAA ACGTATTTTA ACAATAAAGG ACAAGAAATT
ACAACGATTA ACGATACTTT CCCTATAATA GAAAATGGAA AAATTAAAGG CGCTATTGAA
ATATCAAAAG AAATTAGTAA CTTAAAGCAA ACGATAAAAA TAGGCCCTTC TCGAAAACAA
AGCACTAAAT TTACCTTTGA TCACATAATT GGTGATTCTG AAGCCATTCA ATCAATCATT
ACAGAAGGAA AAAGAGTAAT TCGTACATCT TCCTCCATAC TTCTAGTAGG AGAAACAGGC
ACTGGTAAAG AACTATTTGC ACAAAGCATC CATAATGAAA GTCAGCGTTC AACAAAACCC
TTTATTTCAC AAAACTGTGC CGCTATACCT GATACCTTAA TGGAAAGCCT ACTATTTGGC
ACAAATCGAG GTGCCTTTAC AGGAGCAATA GATAAATCAG GCTTATTCGA AGAAGCAAAC
GGAGGAACTT TGTTATTAGA TGAAATCAAT TCATTAAGCC CAATACTTCA AGCTAAGTTG
CTGCGGGCTA TACAAGAAAA AACAATACGA AGAATTGGAG GTACACACGA AAAAGAAATT
GATGTTCGCA TTATAGCAAC TATCAATGAA GATCCCTTTG AAGCCATCGC ACATAATCGA
TTAAGAGAAG ATTTATATTA CCGATTAAGC GTCGTTACTT TATGTCTTCC GCCTTTACGT
GAAAGAAAAG AAGATATTCC AGCTCTTGTT CAGCACTTTA TTGAAAAATA TAATACTCAA
TTCGGGCTCA ACGTAACCGA TGTAGATGTA AATGTAAGAG AATTTTTCTA TGCATACGAT
TGGCCTGGAA ACGTACGGGA GTTGGAACAT ATAATTGAAG GTTCCATGAA CTTGATAGAA
GATGAAACCA TCATTACAGC GTTTCATCTT CCTACTCGCT TTCGCGAACG ATTAAAAAAA
GAATTCAATA TGCAACCTCT CCTAATTAAT AACGATACTG ATGCGCCAAA AACGTTAAAG
CACAAAATAG CAGAAATGGA AAAGAACTAC ATCAATCAAA TTTTGAAAGA GTATCACGGT
AATATCTCAC AAGCTGCAAA ATTTTTAGGA TTAAGTAGGC AAAACTTACA ATATCGAATT
AAAAAACTGC ATTTACACAT ATGA
|
|---|
| Protein sequence | MRTEEINLKQ IIEMNMLYET LLNELDIGIH IINEESKTII YNRKMMEIES MERSDVLYKS
PLEVFAFEEN KNSTLIEALK FGKTKKNIKQ TYFNNKGQEI TTINDTFPII ENGKIKGAIE
ISKEISNLKQ TIKIGPSRKQ STKFTFDHII GDSEAIQSII TEGKRVIRTS SSILLVGETG
TGKELFAQSI HNESQRSTKP FISQNCAAIP DTLMESLLFG TNRGAFTGAI DKSGLFEEAN
GGTLLLDEIN SLSPILQAKL LRAIQEKTIR RIGGTHEKEI DVRIIATINE DPFEAIAHNR
LREDLYYRLS VVTLCLPPLR ERKEDIPALV QHFIEKYNTQ FGLNVTDVDV NVREFFYAYD
WPGNVRELEH IIEGSMNLIE DETIITAFHL PTRFRERLKK EFNMQPLLIN NDTDAPKTLK
HKIAEMEKNY INQILKEYHG NISQAAKFLG LSRQNLQYRI KKLHLHI
|
|---|
| |