| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCB4264_A0058 |
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| Symbol | mfd |
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| ID | 7099761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus B4264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011725 |
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| Strand | + |
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| Start bp | 54409 |
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| End bp | 57939 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643467618 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_002364903 |
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| Protein GI | 218231044 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGGTT TATTAGAGCA ATTTTATAAA AATGAAGAGA TACAATCGGT TATTAATGGA
TTAGAAGATG GGTTAAAAGA ACAACTTATA TCAGGGATGG CAACGTCTTC TCGTTCATTA
TTAATGGCGG CTTTATATAA AAAAACAAAA AAATCACAAT TAATCGTGAC GCATAACTTA
TACCAAGCAC AAAAAGTACA TGAAGATTTA GTGGCGTTAC TTGGTGAAAA AGATGTGTGG
TTATATCCAG TGAATGAACT GATAGCATCG GAAATTGGAG TTGCAAGTCC AGAATTGAAG
GCGCAACGTA TAGAAGTGTT AAATCGCTTG GCTGCGGGAG AGAATGGAAT CATTGTAGCG
CCAGTGGCAG GATTGCGTAG ATTTTTACCA ATAAAAGAAT TGTGGAAGCA AAAGCAAGTT
GAAATCAATC TAGGGCAAGA GATTGATTTA GATGCGCTCT TGCATACTTT ACATCATATT
GGCTATGAAC GTAAGTCGAT GGTAGAAGCT CCAGGGGAGT TCAGTTTGCG TGGGGGAATA
TTAGATATTT ATCCTTTAAC TGAAGAACTA CCATTTCGTA TTGAATTCTT TGATACAGAA
GTCGATTCTA TTCGATTATT TGATGTGGAT GAACAGCGTT CTCAAGGTAA AAAAGAAAGC
GTTAGGTTTG GTCCAGCAAC AGAGTTTTTA TTTTCACAGG AAGAATTAAA ATCAGGAATT
CAGCATCTTG AAGAAGGTTT GACTAAGACG ATGCAAAAAC TTTCTGATGA TAAACTAAAG
ACTACAGTGC TTGAGACGGT AAGTCATGAA ATTGAGATGT TGAAAAACGG GCAAAGTATA
GAACAGATGT TTAAATACTT ATCTATTTTC TATAAAGAAC CTGCTAGTCT CATAGATTAT
TTACCAGAAG ACGGTGTTGT AATTTTAGAC GAGATTTCCC GTATTCAAGA AACAGCATCG
CATCTTGAAA CAGAAGAGGC GGAATGGTAT ATATCACTTC TTGGTGAAGG AACAATTATT
CAAGATTTAT CTTTCTCTCA CCCATTCGAG GGGTTTCTTC ATCATAAAAA AAGAAGTTTT
GTATATTTAA CGTTATTCTT GCGTCATATC GCACACACAC ATCCGCAAAA TATTGTTAAT
GTAACATGTA AAACAATGCA AGATTTCCAT GGACAGATGA ATTTGTTAAA AACAGAAATT
GATAGATGGA ATGAAGGGCA TTTTACGACT GTTGTACTTG GAACAGATGA TGAACGTGTG
AAAAAATTAC AACATATTTT AAGTGATTAT GATATTGAGG CAGATATTGT AGAAGGTACA
GATATTTTAT TGCCTGGAAG GTTACAAATT GCTGTAGGTG ATTTACATGC AGGTTTTGAA
ATGCCGATGC AAAAGCTTGT TGTCATTACT GAAAAGGAGC TTTTCCATAA GAAAGTTAAA
AAATCACAAC GTAAACAAAA GTTATCGAAT GCTGAACGTA TTAAAAGTTA TTCGGAATTA
AAAGTTGGAG ATTATGTAGT TCATGTAAAT CATGGTATAG GTAAATTTTT AGGTATTGAG
ACATTAGAGA TTAATGGTGT TCATAAAGAT TATTTAAATA TTAAATATCA AGGTAATGAT
AAGCTATACG TTCCAATTGA ACAAATTGAT CAAGTTCAAA AATATGTAGG ATCTGAAGGT
AAGGATCCGA AAGTTTATAA ATTAGGTGGT AATGATTGGA AGAAGGTTAA AACGAAAGTT
GAAAAATCTG TACAAGACAT TGCGGATGAC CTAATTAAAC TATATGCTGA GCGCGAAGCT
TCAAAAGGCT ATGCATATAC GCCAGATACG GCAGAACAAC AAGAGTTCGA ATCATCTTTC
CCGTATCAAG AGACAGAGGA TCAGTTACGT TCTATTGACG AGATTAAAAA AGATATGGAA
CGCGGACGCC CAATGGATAG GCTCCTTTGT GGTGACGTAG GATATGGAAA GACTGAAGTG
GCTATTCGTG CGGCATTTAA AGCAATTATG GATGAAAAAC AAGTTGCAAT TTTAGTACCG
ACAACGATTC TTGCGCAGCA ACACTATGAA ACAATTCGAG AGCGTTTTCA AGATTATCCG
ATCAATATAG GCTTATTAAG TAGATTCCGT ACGAGAAAAC AACAAAATGA AACAATTAAG
GGCTTAAAGG ATGGAACAGT AGATATTGTA ATCGGAACAC ATCGTATTTT ATCTAAAGAT
GTTACGTATA AAGATTTAGG GCTTCTTATT ATTGATGAAG AACAAAGATT TGGTGTAACA
CATAAAGAAA AAATTAAACA ATTGAAGGCG AATGTTGACG TATTAACATT AACGGCAACT
CCGATTCCGC GGACGCTTCA TATGTCTATG CTTGGTGTGC GCGACTTATC TGTTATTGAG
ACACCACCAG AAAATCGTTT CCCAGTCCAA ACGTATGTAG TAGAGTATAA TCCAGCATTA
ATACGAGAGG CGATAGAGCG AGAGCTTGCA AGAGGTGGTC AAGTTTACTT CCTATATAAC
CGTGTAGAGG ATATTGAAAG AAAAGCGGAT GAAATTTCGA TGTTAGTTCC AGATGCCCGC
GTAACGTACG CACATGGGAA AATGAACGAA AGCGAATTAG AGTCTGTTAT GCTATCATTT
TTAGAAGGAC AGCATGATGT TCTTGTAAGT ACAACAATTA TTGAGACGGG TGTAGATATT
CCGAATGTAA ATACGTTAAT TGTATTTGAT GCAGATCGTA TGGGATTATC ACAGTTGTAT
CAGCTTCGTG GGCGTGTTGG ACGTTCTAAT CGTGTTGCAT ATGCATACTT TGCATATAAA
CGTGACAAAG TGCTGTCAGA GGTTGCAGAG AAGCGTCTAC AAGCAATTAA AGAGTTCACG
GAACTTGGAT CTGGTTTCAA AATTGCGATG AGAGATTTAT CTATTCGTGG AGCAGGTAAT
TTGTTAGGGG CAGAACAGCA TGGATTTATT GATTCTGTCG GATTTGATTT ATATTCTCAA
ATGTTAAAAG ATGCAATTGA ACAGCGTAGA GGAACAGATG GGGCTGAAAA TATAGTTAAT
GTTGAAATTG ACTTAGAGGT AGATGCATAT TTACCAGATG CTTATATTTC AGATAGTAAG
CAAAAAATTA TGATGTATAA ACAATTTAGA GGTGTTTCTG CAATTGAGGA TATTGAAGAA
TTGCAGGAAG AAATGATCGA TAGATTTGGC GATTATCCAC AAGAAGTTGG TTATTTATTA
CAAATTGCAA ATATTAAAGT GTTGGCAATG AAAGAACAAA TTGAATTAAT TAAGCAGAAT
AAATTTGAAG TAACATTCCT GTTTTCTGAA CAAGCAAGCC AAAATATTGA TGGTGGAAAA
TTATTCATGC TCGGAAATAG TTTTGGACGT ATGATCGGTT TAGGAATGGA AGGATCACAA
TTGAAAATTG TTATGAAAAC AAATGGCTTA GAGACATCGA AGTGGTTAAC AATTGCTGAA
AATTTATTAA AAGGCTTACC AGATGTAAAA AAAGAAGTAA TAAATGCCTA A
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| Protein sequence | MIGLLEQFYK NEEIQSVING LEDGLKEQLI SGMATSSRSL LMAALYKKTK KSQLIVTHNL
YQAQKVHEDL VALLGEKDVW LYPVNELIAS EIGVASPELK AQRIEVLNRL AAGENGIIVA
PVAGLRRFLP IKELWKQKQV EINLGQEIDL DALLHTLHHI GYERKSMVEA PGEFSLRGGI
LDIYPLTEEL PFRIEFFDTE VDSIRLFDVD EQRSQGKKES VRFGPATEFL FSQEELKSGI
QHLEEGLTKT MQKLSDDKLK TTVLETVSHE IEMLKNGQSI EQMFKYLSIF YKEPASLIDY
LPEDGVVILD EISRIQETAS HLETEEAEWY ISLLGEGTII QDLSFSHPFE GFLHHKKRSF
VYLTLFLRHI AHTHPQNIVN VTCKTMQDFH GQMNLLKTEI DRWNEGHFTT VVLGTDDERV
KKLQHILSDY DIEADIVEGT DILLPGRLQI AVGDLHAGFE MPMQKLVVIT EKELFHKKVK
KSQRKQKLSN AERIKSYSEL KVGDYVVHVN HGIGKFLGIE TLEINGVHKD YLNIKYQGND
KLYVPIEQID QVQKYVGSEG KDPKVYKLGG NDWKKVKTKV EKSVQDIADD LIKLYAEREA
SKGYAYTPDT AEQQEFESSF PYQETEDQLR SIDEIKKDME RGRPMDRLLC GDVGYGKTEV
AIRAAFKAIM DEKQVAILVP TTILAQQHYE TIRERFQDYP INIGLLSRFR TRKQQNETIK
GLKDGTVDIV IGTHRILSKD VTYKDLGLLI IDEEQRFGVT HKEKIKQLKA NVDVLTLTAT
PIPRTLHMSM LGVRDLSVIE TPPENRFPVQ TYVVEYNPAL IREAIERELA RGGQVYFLYN
RVEDIERKAD EISMLVPDAR VTYAHGKMNE SELESVMLSF LEGQHDVLVS TTIIETGVDI
PNVNTLIVFD ADRMGLSQLY QLRGRVGRSN RVAYAYFAYK RDKVLSEVAE KRLQAIKEFT
ELGSGFKIAM RDLSIRGAGN LLGAEQHGFI DSVGFDLYSQ MLKDAIEQRR GTDGAENIVN
VEIDLEVDAY LPDAYISDSK QKIMMYKQFR GVSAIEDIEE LQEEMIDRFG DYPQEVGYLL
QIANIKVLAM KEQIELIKQN KFEVTFLFSE QASQNIDGGK LFMLGNSFGR MIGLGMEGSQ
LKIVMKTNGL ETSKWLTIAE NLLKGLPDVK KEVINA
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