Gene PCC8801_4528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4528 
Symbol 
ID7095908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011723 
Strand
Start bp18579 
End bp19346 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID643467509 
ProductPhycobilisome linker polypeptide 
Protein accessionYP_002364805 
Protein GI218203952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value0.242343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.716968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAA TTTTAGAGAC CCCTTTAGAA CTTTCCCCTT CTCGCAATCC TGATGAGGTG 
GCCATCGTTA TTCGGGGAGT GTATAAGCAA GTCTTAGGCA ACCCTCACGT CATGGATAGC
GAGCGCTTAG TCAGTGCTGA ATCTCGGCTA GGCAATGGGG AGCTAAGCGT CCGAGATTTT
GTGCGAGCGG TAGCTAAATC TGAATTTTAT CGCCGTCGCT ATTTTCAATC CTGCGCTCCC
TATCGCTTTG TGGAACTCAA CTTTAAGCAC CTATTGGGGC GTGCTCCTCA AGACCAAGGG
GAACTGTCGT GCCATATTCG TCTGTGTATT GAGCAAGGGT ATGAGGCGGA AATCGATTCT
TACCTCGATA GTGATGAATA TCAGCAGAAA TTCGGCGATA ATATCGTCCC TTATTATCAA
GGGATCCAAA GCCAAGTGGG AAGCAAGCAA GTGGGGTACA ATCGCACTTT GTCCCTCTAT
CAAGGCTATG CTGGGGTTGA CAGTGCCTTT AAAGGGTCTC GTTTGGTGGA CGAAGTAGCC
AGCAATCGTG GTGGCAAAAT TGTTCTACCC CGCAAGGGAG GACGTTTGAG CATTTCCCAA
GATGCCACCG TCAAAACCTT TAAAATATTG GTTAAAGGGT CGAAGTTTGA TTCTCCCCGT
CGGATTAGTA CCACTGAGTA TCTTGTTCCT GGAGACCGGA TGAGTCCCCA AATTCAACGG
ATTCATCGAG CTGGGGGCAA GATTGTCAGC ATTACTGAAG TAGCTTAG
 
Protein sequence
MSVILETPLE LSPSRNPDEV AIVIRGVYKQ VLGNPHVMDS ERLVSAESRL GNGELSVRDF 
VRAVAKSEFY RRRYFQSCAP YRFVELNFKH LLGRAPQDQG ELSCHIRLCI EQGYEAEIDS
YLDSDEYQQK FGDNIVPYYQ GIQSQVGSKQ VGYNRTLSLY QGYAGVDSAF KGSRLVDEVA
SNRGGKIVLP RKGGRLSISQ DATVKTFKIL VKGSKFDSPR RISTTEYLVP GDRMSPQIQR
IHRAGGKIVS ITEVA