Gene PCC8801_4502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4502 
Symbol 
ID7095818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011721 
Strand
Start bp47395 
End bp48303 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content39% 
IMG OID643467450 
Productputative sensor with HAMP domain protein 
Protein accessionYP_002364746 
Protein GI218203891 
COG category[T] Signal transduction mechanisms 
COG ID[COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTTA ATAAACTGAA GCTACGAACA AAATTCAATA TACTACTAAT TACCATATTT 
CTGAGCGGGA TTCTTGCGAG TGGAGTAACT TTATCGTTGA TACTACAACA AAGAGCACAA
GCGGAAGTTA CCGCTAAAGC TTTAGTGTTG CTGCAAACGA TGAATGCTGT ACGCGACTAT
ACTAGCGATA ATATCCAACC CCTGCTATCG CCTCAATTAG AAACGGAGTC GGTCTTTATC
TCTGAAACAG TACCAGCCTA TTCAGCGACA GAGGTGTTCC AAAAGTTACG GAGAGACCCT
AATTATAAAA GTTTTTTCTA CAAAGAAGCG ACCCTTAATC CTACCAATTT AAGAGATAAA
GCGGATAGTT TTGAGCAGGA TTTAGTAGAA ACATTCAGAA AAGATCCCAA TCTTAAAGAA
ATTTCTGGTT TTCGTACCCT TCCTGGGGGG AGGTCTTTTT ATATTGCTCG TCCTTTAGCG
GTTAAAAAGG AAAATTGCTT GCGGTGTCAC GGAGATCCCA ATAATGCTCC CAAGAGCCAA
TTAGCCACCT ATGGAGCGGA TAATGGATAT GGTTGGAAGC TCAATGACAT TGTGGCCGTT
CAGATGCTCT CGGTTCCTGC TGAGGAAGTG TTAAATCAAG CGAATCGCTC TTTTTCCCTA
GTTTTATTGA CTTTATTAGG GGTTTTTGGA CTAATTGTCG TGGGGATTAA TTTTTTACTC
AAACAAACCG TTATTCGTCC CTTGCAAAAA ATGGCTAAAA TTGCTGAATC TATCAGTATG
GGGGATATGG ATACTGAATT TGAGCAAAAA ACCGAAGATG AGATTGGAAT GTTAGCTAAA
GCGTTTAATC GCATGAAATC GAGTTTAGCT ATTTCTATGG ATCTTCTCAA TAAACATCGC
AAAGGTTGA
 
Protein sequence
MLLNKLKLRT KFNILLITIF LSGILASGVT LSLILQQRAQ AEVTAKALVL LQTMNAVRDY 
TSDNIQPLLS PQLETESVFI SETVPAYSAT EVFQKLRRDP NYKSFFYKEA TLNPTNLRDK
ADSFEQDLVE TFRKDPNLKE ISGFRTLPGG RSFYIARPLA VKKENCLRCH GDPNNAPKSQ
LATYGADNGY GWKLNDIVAV QMLSVPAEEV LNQANRSFSL VLLTLLGVFG LIVVGINFLL
KQTVIRPLQK MAKIAESISM GDMDTEFEQK TEDEIGMLAK AFNRMKSSLA ISMDLLNKHR
KG