| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_4452 |
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| Symbol | |
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| ID | 7095829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011721 |
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| Strand | + |
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| Start bp | 5346 |
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| End bp | 6539 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643467409 |
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| Product | putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily |
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| Protein accession | YP_002364705 |
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| Protein GI | 218203850 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAC GTGGCAGCGT TCTGGAGATT TTTTCCACTT TTTTACAGTT TGAGAGTGAC
TGGATCAGTC GTTGGATCGC CGATCCCAAA CTGCACCGGA GTATGCAGCA ATGTCTGTCT
CAATCCTCAC AATCTCAAGA ATCTAACCAT TTTTGGGCTC TCTACTGGCA TAAAGTTTGG
CAAACCCAAA AAAGTCCCCT AGCCTCCGCT CATCTTTGCG CCTATCTTCA GGAAGCGAGT
TATTGGACGG CTAAAAAAAT GACCATGACC TTTGGCAGCA GTCTGTCTCT CATGGACTTA
TTTCAAATTG CCCTGCTCAA AATTGACAAA ATTTTCCAAA CATTCAACCC GCAACAGGGC
ACCAATTTAG AACAATATGC CAGCCTGGTT TTTCGCAGTA TTATTAAAGA CGAATTACGC
CAACGACGGG AAATCGATCT CTGTACCAAT TGGGCACTAT TGCATAAATT GAGCCAGAAA
AAACTCCTTG AAGCCCTGCA ATTTCAAGGA CTGAACCCAG AGGCGATCGC CGAATACCTC
CTGGCCTGGA AATGTTTTCA AGCCCTTTAT GCCCCCAGCC AAGGGAGAAG CACTCGCAAG
ATTCCTGAAC CTGACGCGAC TATGTGGGGG CAAATCTGTC AAGTTTATAA CCAACAGAGC
TTTAAAAAGC CGTTAGAACC CGATATCCTC AAAAAAAGGC TAGAGACCTG TGCCAAAGCA
GCGCGAGCCT ATTTATACCC CCAAATGCTG TCTGTTGATG CCCCTAAACC AGGACAGGAA
GAGGGATCTT TCCTCGATAG CCTCTCCCTC GATCTGCAAC ATTCCTTAGA AAGCGAGATT
ATTGCCCAAG AAGAAGAAGA AATAAGAAAA CAAGAGCGAG AACAAATTAA TGGCGTTTTA
TTAAGAGCCT TAATTAAATT TGATGTTCAA TCCCAACGAT TGCTACAGAT GTATTATGGT
CAAGGTCTCA CGCAACAGGA GATCGCCCAA CAACTAGAAA TCAAACAGTA TACCGTGTCT
CGCCGTCTTG CTAGTCAGCG AAAAACCCTA ATTCTCACCT TAGGACAATG GGCGCAGAAC
ACCCTGCATT ATTCTCTCGA TGCGGACGTA CTTAATAAAA TAAACACGAT TCTCGAAGAG
TGGCTCAAAG TTCACTACCA TCACCCTGAC CTTAGTGCAA GAGAAGTAGA GTAA
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| Protein sequence | MQKRGSVLEI FSTFLQFESD WISRWIADPK LHRSMQQCLS QSSQSQESNH FWALYWHKVW
QTQKSPLASA HLCAYLQEAS YWTAKKMTMT FGSSLSLMDL FQIALLKIDK IFQTFNPQQG
TNLEQYASLV FRSIIKDELR QRREIDLCTN WALLHKLSQK KLLEALQFQG LNPEAIAEYL
LAWKCFQALY APSQGRSTRK IPEPDATMWG QICQVYNQQS FKKPLEPDIL KKRLETCAKA
ARAYLYPQML SVDAPKPGQE EGSFLDSLSL DLQHSLESEI IAQEEEEIRK QEREQINGVL
LRALIKFDVQ SQRLLQMYYG QGLTQQEIAQ QLEIKQYTVS RRLASQRKTL ILTLGQWAQN
TLHYSLDADV LNKINTILEE WLKVHYHHPD LSAREVE
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