| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50635 |
|---|
| Symbol | |
|---|
| ID | 7199466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011701 |
|---|
| Strand | + |
|---|
| Start bp | 36985 |
|---|
| End bp | 39538 |
|---|
| Gene Length | 2554 bp |
|---|
| Protein Length | 843 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185599 |
|---|
| Protein GI | 219130918 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTCC AAATCTACGA CGGGAATAAC TCTCAAAAGC GCAAAAACGC TGCCGTAATG
AAGGATGGCT CTTCCTCCGT CTTTCAGATT CGCCTTTGGG CGGTGTTTCT TTTCACAGCT
TTACTTGGAT CGGTATCGAT TCTACTAACG CTCTCCAGCG CTTTCACTAA TCAGATTAAT
TTCTGCTCAG AGTCTGCTCG GCAATATGAA CCAGGGCCAG TTTCTTGGAG ACAAAGCGCC
ATGGCATTTC AAGCAGTCAA AGCCCATCAA AAATTCACGG AAAAGAGTAT TCAGCGGGAA
ATGCCAGTCA CCCTTGCGCA GGCCCATCCC ACTTCATCAA TGATACTTAT TCGCGCTCTG
GGCAACGCCT TACCGCCGAG ACATAGTACG CAGCAAACTT TGGAAAATCT TGACTTCATT
CTGGCGCACG AAGAGTCGTT TCCCAACACA ACACGACACT GGTTTGTCAA TCGCTTCGTC
GATCCCGAGG TGGAACGACT AGTCCTGGAC CGACTTCAGA AGGCTAACGA ATCCTACACT
GTCATTCCAT TTGACTTGCA GGTCTACGAC AAAATTGAAT ACGCATATGA TCGGATCCCC
AAGGACCAGA TTCATCTCCC TCCTGAAACA ATAGAAGGGG AGGGACTCAC GGAGAAGGAA
ATACTTCTTG CCGAAGAGCA GATACAGCAT GACAAGATTC TATATGTCAT CAATATTAAT
GGGGTCAGGA ATGCCATGCT AGACTACGGC CGCAAACATT CCAGTGCTGA ATACATTCTT
CCTTGGGACG GTAACTGTTT CATGACGCGA AAGGCGTGGT CTTCGATCCA GTCGTCTTTG
GCCGAAAATC CGCTTGCCAG GTACTTCACA ACGCCCATGG ATCGACTCCA AGAGCCCAAC
GAAGCTCTAC TATCGGATAT GTACGTGCCC AATGCGGTGG AAGAGCCGCA GATCATTTTT
CATCGATCGG CTCGGTCCGA ATTTAATGAA AAACTTCGGT ATGGACGAAG AAACAAAGTT
GAGCTGCTTT TGAGGCTTGG TGTGTCGGGG CCTTGGGACA AATGGCCGTG GTTGGATAGT
GAGAAGGCAA TTCTGGATCC AGCCCACGCT TCTGACGCTG TTGGCGATGT ACCAGTAGCT
GGTTGGATAA CGCGGCTGTA TTCAGGAACC AAAGCTGCCG AAGTATCTGG TACAATTCGT
TTTCGAGGCA TACTTCGAAG CCATGCCGTC ACATCGCTTC TGGAACGGCT TGACCTTCGA
GCTGCACAAG ACATACACGG CTTGACTTCT TCAACATTAC TTTTCTTCAA CGAAAAGCAA
TTGATGGGGG AGCGCAACCT CTGGAAGGCA GGTGAGCAGA AAGAAGTCTT TCGAGAGCTA
GTGCAACTGG CTGACCAAGC GCTACTGTTT GGACCTTGGT CGGTTATGGA TAAGCAGCCT
TACGGCTGTG GTGTATCGGG AAATTGTCAT GAATATTTTC ACCCGTCGCC GTACAGGTGG
CCACAGAGGA ATGAATCTGG ACACATCGAC TGGTCGAAAC CGTTTGAGCG GCATGACGGT
ATGCGTGCGC CCGGTACATC CCTCTTTAGC GCCGGAAGTG AGCAGTATGA TCGATCTGGT
TTGGCTGCAA TGAAGTACAA CACTACACTG CTTGCTTTGG CGTATTCGTT GACAGAGAAC
AAGGCTTATG CTGACAAGGC AGCCAGTAAT CTTCGACACT GGTTTCTAAA TAATGCAACG
CGCATGAAAC CACACATCAA CTATGCCCAG GTAAATTGGA GGGCACATGG AAAGGCAAAG
GGTGCATCTG CTGGTCTTAT TGAAATGAAA GATGTGTACT TCTTCTTGGA TGCAGTCAAA
ATTGTGGAAA AATCCCAAGC GCTATCGGCG TCGGAACAGA GCCTTCTGCG CAAATGGTTT
GCGGACTATC TCAAATGGGT GCTCTCTAGT TGGCAGGGTC AAAGAGAGTA TGCAAATGAC
AACAACCATG GCCTGTACTA TGATGTCCAG GTTGCACCAC TTGCCTTGTA TGCTGGCAAC
ATGTCATTGG CATTGTCGAG AATGCACCGG TCAGTGTCGC GTCTCTTGGC CCATGTAGAT
ACAACAACTG GTGCTCTCCC CCACGAGCTG ATTCGTCCAA CATGCGAGCA CTATCAGGCC
TTCACTCTGC AGGGGTGGGC AACCATGGCA CGCATGAGCG AAAAGATTGG TCTGGACTAC
TGGAGTCGCT TCCGCGACGA GGCAACCAAT GAGAGTATTC TATGTCGAGC AATGCGGTAC
GCGAACCCCT ACTTGCGAAA GCGAGAGACA TGTCCTGGGA ACTCACAAAG TGAGGACATG
CGCCGTTGGT GGCCGTTGCT AGTGGATTCT TCACATTACT GTCCTGATCT CGTCAACGAC
GGGTTGTTCA ATGTGAGTGA CTGGATTCCG TCAGAGCTTG TGAATCCCAG CCTAGATCGC
TATTCAATGC CACCTATGTA CGACTATGGT GATGGAATTG CTCCATTCTG GAATGCGGGA
TATCATTCGT AAACATAGTA AAGGTGATCA TATT
|
|---|
| Protein sequence | MVFQIYDGNN SQKRKNAAVM KDGSSSVFQI RLWAVFLFTA LLGSVSILLT LSSAFTNQIN
FCSESARQYE PGPVSWRQSA MAFQAVKAHQ KFTEKSIQRE MPVTLAQAHP TSSMILIRAL
GNALPPRHST QQTLENLDFI LAHEESFPNT TRHWFVNRFV DPEVERLVLD RLQKANESYT
VIPFDLQVYD KIEYAYDRIP KDQIHLPPET IEGEGLTEKE ILLAEEQIQH DKILYVININ
GVRNAMLDYG RKHSSAEYIL PWDGNCFMTR KAWSSIQSSL AENPLARYFT TPMDRLQEPN
EALLSDMYVP NAVEEPQIIF HRSARSEFNE KLRYGRRNKV ELLLRLGVSG PWDKWPWLDS
EKAILDPAHA SDAVGDVPVA GWITRLYSGT KAAEVSGTIR FRGILRSHAV TSLLERLDLR
AAQDIHGLTS STLLFFNEKQ LMGERNLWKA GEQKEVFREL VQLADQALLF GPWSVMDKQP
YGCGVSGNCH EYFHPSPYRW PQRNESGHID WSKPFERHDG MRAPGTSLFS AGSEQYDRSG
LAAMKYNTTL LALAYSLTEN KAYADKAASN LRHWFLNNAT RMKPHINYAQ VNWRAHGKAK
GASAGLIEMK DVYFFLDAVK IVEKSQALSA SEQSLLRKWF ADYLKWVLSS WQGQREYAND
NNHGLYYDVQ VAPLALYAGN MSLALSRMHR SVSRLLAHVD TTTGALPHEL IRPTCEHYQA
FTLQGWATMA RMSEKIGLDY WSRFRDEATN ESILCRAMRY ANPYLRKRET CPGNSQSEDM
RRWWPLLVDS SHYCPDLVND GLFNVSDWIP SELVNPSLDR YSMPPMYDYG DGIAPFWNAG
YHS
|
|---|
| |