Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50629 |
Symbol | |
ID | 7199462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011701 |
Strand | - |
Start bp | 17555 |
End bp | 18524 |
Gene Length | 970 bp |
Protein Length | 304 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185606 |
Protein GI | 219130932 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTTCTAAGGA AGAGCAGAAA CTGTAAGTGA GGACTTCGTC GCTCTGATTG ATGCTCTGCG TAATGCTGCG TACCCAAGCC AAGCTATCAA ATATTGTAAA GGGCTGGCAC CGGGCGAGTC GGGGCGGAGG CAACACGAGG AAAGGGAAGA CTGTCTACAC TATCTATTCG CCAGCACAAG TCCACCATCG GCAGACTCGT TTTGGTATTG GCTTACTTGG ACATGCCTGC TTGTCATATC ATTGCATGGC TATCGTATCA AAATCACTGA CATTGGGGAA GGAAAATTCT TTTCGCAAAG CAGAGTTTCG ACATGCTCGT TTTTTTGCGG CACAGAGCCC TTCACCTGAT AAACATGCAT CATCGGGCGC AACTCCCTTA GTGAACGAGT ATCTCATCGC AGCGTTAATG AGGCAAACAC AAGCGTCTTC TGCTCACAAC GCTCAAGTAC GTTTACTTAT TGATTCGCCC CCTGCAGTAA AGGAAAAGAC AGGCGATTGC AAGCCGCGAA CAATCTCAGT AGTCGTATCA TTGTCAGAAG CGATAAAGAA ATCTATCGAG CTCGACAAAG ACCTCATTGA GATTGCACTC GATCACGAGA TTCCGGTCGT GAAACTTGCA AATATCAAAG TCCTAGAATA CAAGCAATCC AAAATTTTGC AGAAGAAAAA ATCTTCAATC CTTCCAGAAA AAGAATTTCG CTTCCGCGCT GGAATTGCTG AAAACGATAT GACCCGCAAA GTTGACAAAA TGACGGAGGC TCTGGGAAAA GGACACAAGT GCCTCGTGCA GATTCGTTGT CGTCGTCGTG AACTCTTGGT TGATCCACAA GCCGCCCGCA CTACAATCCA ACGCGTTCTG GACGCTGTGA AGGACGTTGG TGAACCGCTC AAAGCTCCTA CTATTCACCC AGAAGGTACT TCCGCACAGC TGTATTTGCA GCCTATGTCC AAGAAAAAAG CATAATCACT
|
Protein sequence | MLCVMLRTQA KLSNIVKGWH RASRGGGNTR KGKTVYTIYS PAQVHHRQTR FGIGLLGHAC LSYHCMAIVS KSLTLGKENS FRKAEFRHAR FFAAQSPSPD KHASSGATPL VNEYLIAALM RQTQASSAHN AQVRLLIDSP PAVKEKTGDC KPRTISVVVS LSEAIKKSIE LDKDLIEIAL DHEIPVVKLA NIKVLEYKQS KILQKKKSSI LPEKEFRFRA GIAENDMTRK VDKMTEALGK GHKCLVQIRC RRRELLVDPQ AARTTIQRVL DAVKDVGEPL KAPTIHPEGT SAQLYLQPMS KKKA
|
| |