Gene PHATRDRAFT_50629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50629 
Symbol 
ID7199462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011701 
Strand
Start bp17555 
End bp18524 
Gene Length970 bp 
Protein Length304 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185606 
Protein GI219130932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCTAAGGA AGAGCAGAAA CTGTAAGTGA GGACTTCGTC GCTCTGATTG ATGCTCTGCG 
TAATGCTGCG TACCCAAGCC AAGCTATCAA ATATTGTAAA GGGCTGGCAC CGGGCGAGTC
GGGGCGGAGG CAACACGAGG AAAGGGAAGA CTGTCTACAC TATCTATTCG CCAGCACAAG
TCCACCATCG GCAGACTCGT TTTGGTATTG GCTTACTTGG ACATGCCTGC TTGTCATATC
ATTGCATGGC TATCGTATCA AAATCACTGA CATTGGGGAA GGAAAATTCT TTTCGCAAAG
CAGAGTTTCG ACATGCTCGT TTTTTTGCGG CACAGAGCCC TTCACCTGAT AAACATGCAT
CATCGGGCGC AACTCCCTTA GTGAACGAGT ATCTCATCGC AGCGTTAATG AGGCAAACAC
AAGCGTCTTC TGCTCACAAC GCTCAAGTAC GTTTACTTAT TGATTCGCCC CCTGCAGTAA
AGGAAAAGAC AGGCGATTGC AAGCCGCGAA CAATCTCAGT AGTCGTATCA TTGTCAGAAG
CGATAAAGAA ATCTATCGAG CTCGACAAAG ACCTCATTGA GATTGCACTC GATCACGAGA
TTCCGGTCGT GAAACTTGCA AATATCAAAG TCCTAGAATA CAAGCAATCC AAAATTTTGC
AGAAGAAAAA ATCTTCAATC CTTCCAGAAA AAGAATTTCG CTTCCGCGCT GGAATTGCTG
AAAACGATAT GACCCGCAAA GTTGACAAAA TGACGGAGGC TCTGGGAAAA GGACACAAGT
GCCTCGTGCA GATTCGTTGT CGTCGTCGTG AACTCTTGGT TGATCCACAA GCCGCCCGCA
CTACAATCCA ACGCGTTCTG GACGCTGTGA AGGACGTTGG TGAACCGCTC AAAGCTCCTA
CTATTCACCC AGAAGGTACT TCCGCACAGC TGTATTTGCA GCCTATGTCC AAGAAAAAAG
CATAATCACT
 
Protein sequence
MLCVMLRTQA KLSNIVKGWH RASRGGGNTR KGKTVYTIYS PAQVHHRQTR FGIGLLGHAC 
LSYHCMAIVS KSLTLGKENS FRKAEFRHAR FFAAQSPSPD KHASSGATPL VNEYLIAALM
RQTQASSAHN AQVRLLIDSP PAVKEKTGDC KPRTISVVVS LSEAIKKSIE LDKDLIEIAL
DHEIPVVKLA NIKVLEYKQS KILQKKKSSI LPEKEFRFRA GIAENDMTRK VDKMTEALGK
GHKCLVQIRC RRRELLVDPQ AARTTIQRVL DAVKDVGEPL KAPTIHPEGT SAQLYLQPMS
KKKA