| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50621 |
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| Symbol | |
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| ID | 7199454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011700 |
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| Strand | - |
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| Start bp | 148479 |
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| End bp | 150157 |
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| Gene Length | 1679 bp |
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| Protein Length | 420 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185589 |
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| Protein GI | 219130895 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.774573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGCGTTTCCT GTTTCGTTCA CCACACTAGA TAGAAAAAAG CGATGTCCAA GCCTTGATTG
GGGCCATGAG CGACGAAGAT TCCGCTCACA GCAACGAACA AGAGCTCAGA AGGTTACTTA
GTGAACGCCT CGCTGCACTT GCTTCGGCTT CCCAGAGAGA AAGTGCGATT AACCAGCCCC
AAAACCTTCT AGCTCCCGCT CTTCTCGTAC GTCACTCTCA AGTCCAAGAC GTGCCAATTG
AAAACCCAAT TCAGTCATAC ATGGAGGAGC TCAAGAGGGT CCATCTTGCA GCGGCGGCGG
GAAGCCTCGA AAATGCGCTT CGAATTTTGC TGTCTACGTT GGCAAATACA GCGTCCAGAC
TGCATCCTCC TCCCCACGGT CAGAGCACGA CTAGCAACAG CAGCAAGACG CCTTCAGAAG
GAGTTGCCCG ACAACCTTTC GTATCGGAGG AAAACGAGGC ACCGAATCCA AATGTTTCCG
TTGAAAAATT CTTGGCCATA CTGCAAGGAA GGCCGGTCCT TGATGGTGCT ACTCCGGTGC
AAGATGCATC AAAGAATCTA CAAGCCTTTC AGCAACTTCA ATCTCGGCTT CTTTTACAAT
CCCTTGTCGA GATAAATCAT CAGCAGCAGC TTTGTAAGAA ATTACCAGCT AATCCGAAAC
CAGACCTTGG AAACGAGGCT AGAGAACTAG TTGCCGCAAA CTTCCTAGTC GGGATGAGGG
ATAAACTCGA AAGTGATATG GATGCCAGCG GAAGAGCTGG TATATCTCAT ATTTCAAGAG
CGTCCGTAGG TTTTGACGAA AGGGTGGCAG CAGCAGACAA ACGCAAAGCG GGTATCCAAT
CCCTGTCCAG AACAGCAACA ACGGTCAGTT CCGTTGCGGT AAAGCCCAAG TCCGGTTCCT
TAGCTGTCCC AACGGTACCA AGCGAAGAGT TCAGTCGATC CTTTTCAGGA ACAGGTTCAA
GCTCATCAGA TTTGTGCGCG ATAGAGCGAA GTAAAGCTCA GGAGGGTCGT GAACCGTTTC
CACAAAAGCT GTACCGTTTG TTAGAAGAAG TAGCTGACCT CGGCAACGAA GACGTTGTGT
CCTGGATGCC TGGTGGATTA TCGTTCCGGA TACATAAGCA AAGAGCATTT GTGCGAGATA
TTGCCCCAAA GTACTTTCGA CACACCAAGA TGAGTTCGTT TATGCGACAA CTGCAAATGT
ACAGCTTTCA CCGCATATGC GAAGGCGGTA TCGTGGATAT ATACATGCAT CCTAACTTTA
AGCGCGGATT CCCGGAATTC CTCCCCCGAA TACGAAGGGC TGGGGCACCA GCATTGAAAG
GCAAGTAAAT CGGCGAATCG ATGCGATGCT TTAGCAGTAG TGAGTGATAG ACGCCACTTC
AGTATCGTCG TTTTCTCCAT CGATAAACTT GTGGAACACA AGTTAACCTA TGAGTAAAAA
GGCCCAATTG CTCACAAATT TAAAGCAATG GAAAGTAGAG ACATACAAAG TCTCATGGAG
ACAAGGATTG TTTGCTTGCT TACTCTTTCT GCATGTTTTG CAATCCACCC TTTCGCCTTC
AAGGCTAGGC GGTCCATTTC AGCTGGTCGG TCCTCATTGT GCACCCAAAG TATATTGATG
GACGGTCTAC TGGTGGCGCA TTGCAAAGTA GAGATTGCAC GAGAGCTCTG TACCTTCGT
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| Protein sequence | MSDEDSAHSN EQELRRLLSE RLAALASASQ RESAINQPQN LLAPALLVRH SQVQDVPIEN
PIQSYMEELK RVHLAAAAGS LENALRILLS TLANTASRLH PPPHGQSTTS NSSKTPSEGV
ARQPFVSEEN EAPNPNVSVE KFLAILQGRP VLDGATPVQD ASKNLQAFQQ LQSRLLLQSL
VEINHQQQLC KKLPANPKPD LGNEARELVA ANFLVGMRDK LESDMDASGR AGISHISRAS
VGFDERVAAA DKRKAGIQSL SRTATTVSSV AVKPKSGSLA VPTVPSEEFS RSFSGTGSSS
SDLCAIERSK AQEGREPFPQ KLYRLLEEVA DLGNEDVVSW MPGGLSFRIH KQRAFVRDIA
PKYFRHTKMS SFMRQLQMYS FHRICEGGIV DIYMHPNFKR GFPEFLPRIR RAGAPALKGK
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