Gene PHATRDRAFT_50618 details

Gene Information

• Locus tag: PHATRDRAFT_50618
• ID: 7199433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011700
• Strand: +
• Start bp: 137207
• End bp: 139259
• Gene Length: 2053 bp
• Protein Length: 598 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002185567
• Protein GI: 219130849

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0981009
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGAACTACGG ATGACCCACA TCTTCACTAG AAGGCCTTTC TCACTCTCCC ATCTATCCAG 
GGGTCCTCAT TCGTGAATCC CCTTAACCAC GTATACCTGC AATTGAGATC TATATCCGCG 
GAAAGGTACA TCACATGTTG ACAGTGAACA ACACTTGATA TGAAAGAAAA AAATGACCAC 
TCACCAAAAA CTTCGAACCA TGAGTTGGAG TCTAACGAGG AAACGGGAGT GAATAGTCCT 
GCGGAGTCGG ACGCCTCCTC TCCTTCGTGT GGTGAACAGC CAAAGCAGCC ACGATCGTCA 
CCAGAATCGT CTAAGGTGCT ACGAAATGTG CCCGACAAAG GACCACAGGA GGCCTCCACG 
GATGGGAAGC CTATTGCCAC TACGGCAAAA AATGAAATGT TTGCAGAACC CGCTCAAGAT 
ATTCCATTCC CAACGGAACT GCAGCGAACT GCGCAGAGTA CACCAGGGGC TTTTCCGCAA 
ATTGGAATGG GAAGTACGAG AAGCAGCGAG ACGCCAGTGA CCCCGCACTC CGCTCCGACC 
CGCGATGGTT CCCAGCGTTC CGGATCGGCG GAAGAGGATT TTTCCAGTGC CGGCGAACCG 
CCGCTGTTGG CGGCGACTCT GGTGGAAGAT ACCCCCGAGC GAAGTGATAC GACAGGGACT 
ACCGGGCCCA ACGAAGCAGA ATCGGACAAA CTGATGGTCG TGGCTGTGGC CGAGCCTGTG 
GAGCAACGAA CCGATACAGA GAAGGCAGCG TTTTCTCGAG GAGCCTCTTC GAAACGTTGG 
CGCATGTTGT ATGGAGCATT GCTGATAGCC GGGGTAGTCG CGCTGGCCGT GGGGGTGACC 
CTGGCATTGA CGATACAAAC GTCATCGGGG TCATCAACAA CATCGTCTTC GTCAACAGCA 
CTCGGGAGCC CCAACGGCAC CAATGCTTCC GTGCCGGATG ATACCAATAC CCCCCTTCTC 
AACGATACCA ATACCAACGA CTTCAACGAG GACGTTGAGC AACCCATTCC CGGCAATATT 
CCATCTAGCG CGCCGGGAGG ACCCGTCGTA CAGAGCACCC ACCTGGTAGC TTGGGAAAGT 
AGTTGCATGG ACGAAAAGGT AACTGCAGAA ATCCAATGTG GAACTAATGA AATTTTGTCG 
GTCCAAGAAG CAAGAATCGC AGAGTGTACG ATTCAATCGG ATCAAGGCTC GAACAGGGCG 
ATTTGCCTGC CTTTAACTAT GAATGGTACC ATTGAAAGCC TTGAGAGTGC CAATGGCAAT 
GATGTACGAG AGATAGCCAT GGTTCTGTTT CAATGTACCG GAGTGGAAGA TCGTCCCAAC 
GGTCCAGTCC GAGCGCGCTT GGTCCCAACC AGAAATGTTG ATACAACTGC TCCTGCAAAC 
ATGGACTGGC TCTGTGTCAG ATTTAACGAG AATCTCCAGT CGGCCATTGC CGATACAGTT 
CCTGCCACCG CTATGGCTGA CTTTGAAGTC GAGCTTTATA TAGTATTAGG TGACTTTTGT 
CTGGAAAGAC GCAGTCAAGG CGACATCAAC GCTGTCCGCC ACCGGCTTCG TACCAATACG 
CGTCGACAAC TTGTCGAAAG CAATGTTAGT GACGTGGAAG TCGAGAACGC CACCGGAGAT 
GACACGAGTG AGGGCTGGAG ACTACAAAGT TTCGTACCGG GTTCGTGCCA GCTCCCCGCC 
CGCAATCTGT TGATGGACGC GGAAGCGACC GGTGCTGCCG AGAACGAGTG GCTCCAGGTG 
TGCTACGCAT TCGACAATGA CGATACTGGA GACGACGATG ACGACGGCAA TGATGCGAAC 
GAAGACGAGC TGGTCGTAGT GCACGCGTCG GTCTCCTGTC GACACGAGAT TGGTCTTGGT 
CCCAGCAGGG CGGCGGTATG GAACGAATTC GAACGACGCA TTCGTCCCCC ATTGATTTGG 
CGAGAATTGT GGAGCACAAC CATGACTGGA GTGTAGATTC TTCACGGCGT TTGGCACGTG 
CGTGGTTGCG GGAATTTTGG TAGATATTGG ATACGTGAGG AACGGGCGTA TACAGACTGT 
ACCGACAACC ATT 

 

Protein sequence

MKEKNDHSPK TSNHELESNE ETGVNSPAES DASSPSCGEQ PKQPRSSPES SKVLRNVPDK 
GPQEASTDGK PIATTAKNEM FAEPAQDIPF PTELQRTAQS TPGAFPQIGM GSTRSSETPV 
TPHSAPTRDG SQRSGSAEED FSSAGEPPLL AATLVEDTPE RSDTTGTTGP NEAESDKLMV 
VAVAEPVEQR TDTEKAAFSR GASSKRWRML YGALLIAGVV ALAVGVTLAL TIQTSSGSST 
TSSSSTALGS PNGTNASVPD DTNTPLLNDT NTNDFNEDVE QPIPGNIPSS APGGPVVQST 
HLVAWESSCM DEKVTAEIQC GTNEILSVQE ARIAECTIQS DQGSNRAICL PLTMNGTIES 
LESANGNDVR EIAMVLFQCT GVEDRPNGPV RARLVPTRNV DTTAPANMDW LCVRFNENLQ 
SAIADTVPAT AMADFEVELY IVLGDFCLER RSQGDINAVR HRLRTNTRRQ LVESNVSDVE 
VENATGDDTS EGWRLQSFVP GSCQLPARNL LMDAEATGAA ENEWLQVCYA FDNDDTGDDD 
DDGNDANEDE LVVVHASVSC RHEIGLGPSR AAVWNEFERR IRPPLIWREL WSTTMTGV