| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50615 |
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| Symbol | Sec7C |
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| ID | 7199432 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011700 |
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| Strand | - |
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| Start bp | 91695 |
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| End bp | 97321 |
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| Gene Length | 5627 bp |
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| Protein Length | 1838 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185583 |
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| Protein GI | 219130883 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCGA CGAGTAGCAG TACTGCTACT GGTACAAAGA ATCAGTCGGT TGTTGCGGTG
CACGGTAGTG CGGCAACGTC GTCGTCTAGC ACTGCGAGTG GTGGACTGTT GCCCCACGAG
GGTCACTACA AAGATACGGC GGGTCTCGGT TCCATTTCCG GTTCGATCCC CATCGTTGGT
GGAGTACTCA CAGTCAACGA TTGCCGTAAA GACGTCGACG TGTCGGACGT ACGTCGGTTG
TCCCGCAAAT CGATACCGAA GACGACAACA TCGCGTCGAG GGAATTCGTC GCCGACAGAG
CCGGACGTTC ACGAATCTTC CGAATCCTCC TCCTCCGCCA GCAGTAGTAG TAGTAGTAGC
GCGACAGACA CCAACAACGA GGACGAGGAG GAACACGACG AGGACCATTC GCCAGTCTCA
TCGAAACGAG TTTCGGTCGA TTGTGCGGTA TCCATGGAGT CCGCCTTGGC GAGTCCAGCC
GTGCCCCACG TTCCCGAGTC CGTCCCGCCG ACGGCCCATT GTGCGGCGAC CCAGACCGAT
GCCCTTCCCA CGGCCGGAAC GGGGACTACA CGAACCCCCC ACACGGGTTC CCCCGCGTCG
GCGGGAACGA CGCAGACTCT ACTCGTCCCG CCGCACGTGG CGGTCCGGGT CATCAAGGGC
GAAATCCATA ACGTCCTTAC CGTTCTACGC GCCGATCACC GCTATTTATC CCACGATCGA
TTCCTACGGG AGGAGGAAGA AACCCGACAC GTCGTCGTGG ACGAATTGCA ACATTTGCAC
GAGGCATTGA GTGTGTGGAA AGACACCACT CGTGACGGTA CAATCGAGAC CACCCACGAT
CTGCCACCGA GTGGGGGACT GCCTTCGTGT GCGACCTATC TGCCGCCCTT TTTGCACGCC
ATACAGGCCC GAGAAATCTC CGCTCCCGTC ACGGGGGCCG CCTTGAACGC GATTCATAAG
TTCCTCCTCT ACGGATTCCT ATTGCCTCTG CCCCGTACAG ACTTTACGGA TGTTTCCCCC
ACAGCGGAAG CCACCCGGGG TATGACGATG ATTGCACAAG CCTTGCTCCA ATGCACCTTT
GAAGAAACCA CCGCGGCGGA CGAATACAAG CACCGAAGGG GGTTGTCGTC GATGCACACG
GCTGGAGGGC TGGCGCAGCC ACGGGGCGCC GGGAGTGCGG CCAACGCCGC AGCCAAGCAG
CGCCAGGCCG CACAAGACGA AAAGGTCGTT CTTAAATTAC TCGAACTGGC CGCCCTGGTG
GTCCGCTGTG GGGTAGATTT CGACCGCCAA TTACTCTCCA GTGGACACAT TGTGGGCTTA
CTCGATACCA CCTTACACGT GTCGCACCGG GCCAGTCGAG CCAGTCCCTT ACTACAGTCC
GCAGCCTCCG ACGCCTTGGC ACAAATCGTC CTACAAGTGT TTGCCACCAC CAGCAGTAGC
ACCGCAGCTG TTACTGACAA CCAAGGCACC AGACAAACGA CCGCTCGTCT CGAGATTTGG
CAACAGCTCG CCAATTTGCT CAATCCGGCA ACGCACGATG AACGTGTGAC TGTATCGTCA
TTGACAGCCG TCAATATCGC TTTGGAAACA TGTCGGGACG ATTTGATGCC GGATGAAATT
ATCCTTTTAC AGAATCAAGT CTGCAAGTAC CTCTTGCAGT GGAGTACTTC GCACGATACG
CAAATTTTAA GTCTGACGCT TCGTGTTATC TTTAATCTCT TTCAATCGAT TCGGAATCAT
TTGAAAGTCC CACTCGAAGT CTTTCTTACG TCAGTACATC TGCGCTTGCT GGATACCACG
TTGGATGAAG AGCGTGAAAT CGCCCTCGAG AGTTTACTCG AATTCTGTCA AGAACCAGCG
TTGATGCAGG ATTTGTACCT CAATTATGAT TGTGACGTTG CCTGCAGTAA CTTATACGAA
TCGCTCGTAA CGGCCTTGGG CAAAACCGCC CAACCTGTAG GATACGATGG TAACCACAAA
CGGCGCGTGG GACAAACTGA TGTGATTGCG TTGGATGCGT CTACCAACTC GGAGGCTTCC
AGGTCGCGTT TTGCAACAGC AACAACGGCA CCTGCGGTAA CTCACTTGTC CATTTCTCTC
GCTGCGCCGC CTTTGAACTT ACTGAATCGC CTCGCCATGG ACGGGTTGTT GGCAATTTTG
GATTCCATTG TCAGGCGTTG TGACGTTGTA CCCCTATCAA CCGAAACACA GCAGCTCAGG
TCATCATCTC TGGACCGCGT CAATGGCAGT CATGGCAGTC TCCATTCGTT CCGAACACTG
AGCTCTGACG ATATCATGAG CGAAGACGAG CTTGATTATT CCAACCATCT AACCGAAAGT
ATGTTGCACG ATCGAAAAAA ACGCAAACAT GCGTTGACAC GGGTGGCAAC CATGTTTAAT
CAAGATCCCA TGGGAGACAA ATGGCGGATG CTGGCTGTCG AACAAGGTGT GTTGGATAGT
AATATTAGTG TGCATGGAGT AGCAGAACTC TTGCACACGG CGCCAGGCTT GGACAAATCA
CAAGTCGGTA TATTTTTAAG CAAAGGACCG GACAAGGAGT ATCCTTTCCA TGCTGAAGTC
CGAGCCTCTT TTGCTAGCCT CTACGACTTT GCGGATCTAC CTTTTGCCCT GGCCTTGCGT
AAATTCTTGT CCAAATTTCG GTTGCCCGGC GAAGCTCAGT GCATCGACAG ATTTATGGAA
GCCTTTTCCA AAGAACTCTA CCATCAGCAA GGAGCGTCAA TTTTTGCCAA CGCTGACGCT
GTCTACGTCC TCGCTTTCTC GACAATAATG CTGAACACAG ATTTACACAA CCCGACAATC
AAGGAGGACA AACGAATGAC ATCTGATCAG TTCGTTCGAA ATAATCGTGG GATCAATGGT
GGTAAGGATT TGCCAGCCGA ATTTTTGAAG GATCTATATA TTCAAATAAA AGAGAATCAG
ATTCAAGTAC GAAGGGAAGT GGGGGATCTT GTATCAAGGC ATGAGCACGA AGATACTAGA
GCTGCTTGGG AGAGTATCCT GGCCAAAAGC AAGGAAGTCG CATCGCCTTT CTTTACACCC
GCAGGCCGAA CCCGGCGCCA AGCCTCGCGC TCTGGACTAC ACGATAAGGA AATGTTTGAA
GTTCTCGCAA TTGCAGTCCT GCGTTCCTTC CCTGGTATTT TCGAGCGATC GTGGGACGAC
GCGATGGTGG TTAAAGCGTT GCGTGGATTG CAACAAACTG CAAAACTAGC AGCTCATTTT
GACATGAACT CGGTATTCAA TGAAATTCTC GAATTTCTTC TTGCGAAAGG GCGCGATTAT
GTAACCGAAT GCATAACCAT GGACTGCATC CATATGGACG GGGACACATC AGTTGTCTCC
AATTCCAAGA CAGCTGTTTC CAACGAGACT ATGGACGACG ACGAAACAAA TGTGCCTGAA
ACAGAGCAAC CAATTCCTGA AGGGTTACTG TGCTCAAGCT CATCACATTC CTATGATGAT
ATTACTGGTG CAGCCGTACA TCGTGGTCTG CTGGCGTTTG ATAGTGGATT TGTAATGGTC
CGAAAGAATG CACGGAGAGT GGTTGGAGCC TGGCCATTGT TTGTCGAGTG CATCTGCGCG
CTTCGCGATG CCAAAGCTCT ACCAGTGGGT CTCTCTGATC TGGATGACTT TGCAGATAGC
AGTGGTAATG TTCTGCCTCT GTCACCGTTC GCAAAGAAGT CAAAACGGAG TTTAGAAAGC
TACTATAGGG TAAAAGCCGA CCCGGACGTG TCCGAGAACA GGAAGGGATG GTTCCGAGCT
TTCTTCAAGA AGAGCAGCAA AGCATCTGAT GACGACTCGC TTGATGATCA CCTAAGCACT
GTACCTGACA AATTCGATGC GTCATTGCAC GCCAAAGTTC TCATGGCTAT AGCCGAAGCG
GCCGATATTG AAAAAGTTGT TCAGATGGGG TCGGCTATGC TTCCCAATGC GGAGACAATC
ATTGCCTCAT TGCTACAATT TGTTGAAAAA TACCCATTCG ACTCGAATCC GATACAAGAA
CAGCACGCAG TCTTTGGTCT GGAATTGGCC GCCCGCATGC TACTTTCCAA CAGGCGTCAA
GCCCCATCTT TGTTCATGAT GTTTCTAAAA ACGTTTGAGA AGGTGTTCGA GCTAGTTTCG
GACACGAATG TTCCTTCACC TTTTTTTATT GAGCGTATTG TTGTTACTGT TTTACGCTCA
AGCATTCATT TGTATGACTT TGACGAGGTA TGTGCTTTCC AACAACTACT TACTAGTCTG
GTTCACTATC TTACAATTTG TTTCAACACA ACAGCTCCGT CCGCATTTGC GCGCTTCACT
GCATTTGCTT ACGATGACTT TGCCAAGAAC CTTTGTGCGG CAAATTGCTG ATCGAATGGC
TTGTGGTTTA GCAATCATTT TGCGTGCCAG CTACCATTTC TTCGAAACAC CCAACGATTG
GGCCTTTATG GGGGATACGC TTGACATGCT CGCAAACCAT AGTGTGTCGA GAGTTTTCGT
TTTCGACGGA ATAGCATCAA CCGTAGAGCA TGCGATACCA GTTGAGACAG AACGAGCGGC
AAAGGGCAGA GAAGAGCGTC CTTCTCTGTC AAAAGAGGCA TCTAGTGCTC TGGCAAGGAT
CTTGACGCGA TTTGTGTTAG GATTTTATCA GCGTGACTTG ACTTTGCAAG TCCCAGCCAT
GTTATGTTTG GAAAAAGTAT ATCGACACAA GGTCGATCTT TTGTTAGACG CAGCTGTCAA
AAAGACAAGC GCCGAATGCG GTAGTAAAGA TTCAGTCTCC GAGTTTGACC CGCTTGCTTC
CGTACCTGAC AAGGATCTTT GGCAGAATAT TGCTGTTGCC GTCTACTCGG TTTGTCGGTC
CGTTGACGTG GACGTGTCTC GGAACGGCGT GGAATGTTTT CAGCGCATAA TTCTACGAAC
AGGCATTGAC CAGATAGCGC AGGAAAAATG GGTTGCAGTC TTGTATTTAA TAATCAACAA
GCAGCCGCCT ACGACTGCAG ACGTTAGCCG CGGCAACACG TTCTCCTTGC TCGGCCAATT
GCTGAATATG GTGTTGCCCT CCCTAAGTTA CAGCAAAGAC AATCGCGATG ATCTTGTGGA
TTTGATTCAC GCCACGGCTT CTCTAGCACA GGACAATCTT CAACAGGGAA GACGCGGTAG
TGTTTCTCCC TTATTTCAAA AGACGCTTCA GACCGTCACG TATCTGTCCA ATAATATGGT
GACAGAGGAA TGGACAGGCG AGCCCGAATT CAGCGCTTGG GCAAGTGAAA CTTTATTGCA
TGAACTCGAA AAGGTTGGAG CAGCTGGTGC ATCCTTGAAA AACCAAGAGG CAATCAAACG
GCCTGCTGCT ACTCCACCGG CGGCGGCAAA GACGACACCA ACGGTTTTGC GCTCAAATAC
AGGGGAACAT GCACAAGAGA CAGAGACGCA CATTAAACGA GAAAAAGAAG TAGAAACAGA
AATTGAAAAG TCAGTGATCC ATGCGAGCGA AGAATTGGCG GAACCTATCG AAGACGAAAC
GGAGGAACAT TATGCAAGTG ACTTTGAGGA AGATGACACG GAAACTTCCG AGCAGTATCT
GTGACACATA GAAAATAGGA TGATAGAATC TTCATTACGA TTCGTTT
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| Protein sequence | MIATSSSTAT GTKNQSVVAV HGSAATSSSS TASGGLLPHE GHYKDTAGLG SISGSIPIVG
GVLTVNDCRK DVDVSDVRRL SRKSIPKTTT SRRGNSSPTE PDVHESSESS SSASSSSSSS
ATDTNNEDEE EHDEDHSPVS SKRVSVDCAV SMESALASPA VPHVPESVPP TAHCAATQTD
ALPTAGTGTT RTPHTGSPAS AGTTQTLLVP PHVAVRVIKG EIHNVLTVLR ADHRYLSHDR
FLREEEETRH VVVDELQHLH EALSVWKDTT RDGTIETTHD LPPSGGLPSC ATYLPPFLHA
IQAREISAPV TGAALNAIHK FLLYGFLLPL PRTDFTDVSP TAEATRGMTM IAQALLQCTF
EETTAADEYK HRRGLSSMHT AGGLAQPRGA GSAANAAAKQ RQAAQDEKVV LKLLELAALV
VRCGVDFDRQ LLSSGHIVGL LDTTLHVSHR ASRASPLLQS AASDALAQIV LQVFATTSSS
TAAVTDNQGT RQTTARLEIW QQLANLLNPA THDERVTVSS LTAVNIALET CRDDLMPDEI
ILLQNQVCKY LLQWSTSHDT QILSLTLRVI FNLFQSIRNH LKVPLEVFLT SVHLRLLDTT
LDEEREIALE SLLEFCQEPA LMQDLYLNYD CDVACSNLYE SLVTALGKTA QPVGYDGNHK
RRVGQTDVIA LDASTNSEAS RSRFATATTA PAVTHLSISL AAPPLNLLNR LAMDGLLAIL
DSIVRRCDVV PLSTETQQLR SSSLDRVNGS HGSLHSFRTL SSDDIMSEDE LDYSNHLTES
MLHDRKKRKH ALTRVATMFN QDPMGDKWRM LAVEQGVLDS NISVHGVAEL LHTAPGLDKS
QVGIFLSKGP DKEYPFHAEV RASFASLYDF ADLPFALALR KFLSKFRLPG EAQCIDRFME
AFSKELYHQQ GASIFANADA VYVLAFSTIM LNTDLHNPTI KEDKRMTSDQ FVRNNRGING
GKDLPAEFLK DLYIQIKENQ IQVRREVGDL VSRHEHEDTR AAWESILAKS KEVASPFFTP
AGRTRRQASR SGLHDKEMFE VLAIAVLRSF PGIFERSWDD AMVVKALRGL QQTAKLAAHF
DMNSVFNEIL EFLLAKGRDY VTECITMDCI HMDGDTSVVS NSKTAVSNET MDDDETNVPE
TEQPIPEGLL CSSSSHSYDD ITGAAVHRGL LAFDSGFVMV RKNARRVVGA WPLFVECICA
LRDAKALPVG LSDLDDFADS SGNVLPLSPF AKKSKRSLES YYRVKADPDV SENRKGWFRA
FFKKSSKASD DDSLDDHLST VPDKFDASLH AKVLMAIAEA ADIEKVVQMG SAMLPNAETI
IASLLQFVEK YPFDSNPIQE QHAVFGLELA ARMLLSNRRQ APSLFMMFLK TFEKVFELVS
DTNVPSPFFI ERIVVTVLRS SIHLYDFDEL RPHLRASLHL LTMTLPRTFV RQIADRMACG
LAIILRASYH FFETPNDWAF MGDTLDMLAN HSVSRVFVFD GIASTVEHAI PVETERAAKG
REERPSLSKE ASSALARILT RFVLGFYQRD LTLQVPAMLC LEKVYRHKVD LLLDAAVKKT
SAECGSKDSV SEFDPLASVP DKDLWQNIAV AVYSVCRSVD VDVSRNGVEC FQRIILRTGI
DQIAQEKWVA VLYLIINKQP PTTADVSRGN TFSLLGQLLN MVLPSLSYSK DNRDDLVDLI
HATASLAQDN LQQGRRGSVS PLFQKTLQTV TYLSNNMVTE EWTGEPEFSA WASETLLHEL
EKVGAAGASL KNQEAIKRPA ATPPAAAKTT PTVLRSNTGE HAQETETHIK REKEVETEIE
KSVIHASEEL AEPIEDETEE HYASDFEEDD TETSEQYL
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