| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50610 |
|---|
| Symbol | |
|---|
| ID | 7199446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011700 |
|---|
| Strand | + |
|---|
| Start bp | 77337 |
|---|
| End bp | 78523 |
|---|
| Gene Length | 1187 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185562 |
|---|
| Protein GI | 219130839 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCT CCAGTTGCTC TTTCGCTGCA ATCATGCAAA TGAACAACGC TGCCTTGTCT
CTGGTGCGGC AGGGGCAGCA CGCGCGAGCT AATAGACTCT TGCAAACCGC CATGGACTGT
CTCAAAACCG AGCTCGCTCA ACCTGCGGAA GATACTACTG TTGGAGGGAT GCAGCAGTCC
CCGGGAACAG CGTCCCTGCA GGTTGTAATG AGTATTCCGC TCCCACCGTA TCCTCCTCGT
GTCGGAGCAA CTCTACCGGG ATTCACGGCG ACGGAAACAA ACACTAACCT TCCCATACGC
TACGTCAATA ACAACGGCCA CAGTGATTCT CGGATGGAAA CTCCAGTAGC GAACGAGCAA
TACAACTGCG AGGACTTCAC CTCGGTCCCG CATGGATTTT TCAACAGAGC GTTTGCCGTC
GCACCTGAGG ATACTGCAAC CGGTGGCCGC CGGGACCCGT TTGCTGCCTC TGTCTCCGGG
ACCGTTGCCT CGGCAACTTC GGAGGAACTG GTGATTCTTA TCGTGATCTT GTTGTTCAAC
ACGGGGCTCA TCTATCATCG TGAAGGAATC GCGACGCACG CTGATCGACT CTCGACCACC
AATTACCAGG TGTCAAGGGA GAACAATCCC TTACTCAAGG CTTTGGTTCT GTACGACAAG
GCCATCCAAG TCGCCGAAAG CGTGGATTGG TCAAAAAGCA ACAGTTCTGA TACTTTCCAT
TTGTCCACGT TGCTTGCGGT GCCGTACATG GCGCTTTGTA TCAACAAAGC CCACATCAGC
GGGGAGGCTT TTCTGAACCG CGAACAACGA TCACACGCCG TACACAAGTT CTCCGAAACC
TTTCGAGCGC TTGGTCCAGC CAAAAATATT CTAACGCCCG AAGAATCCGC TTTCTTTTTC
ATTGAAAGCT GGTTTGTATC CGTGGGTTGG AATCATTTCG CTGGAGCAGC TTGACCTGGA
TTGCAAGGAA TTCTGGTGAA CAGAGAGTCG TTCGCAGGAA TGCTTACTTC GGCTTCAAAG
GATGAAGAGC AAGTGCGCAG GCCCTTTTTT CCTCATTGCT ACCGATTTTG AATTATGTTG
AAAGAATCGT CCACTTGTCC AAATCACGCG TGAGAAACCA TTTTTGCAAT GCGCCAAATT
CATATATATA CATACATCTT GACTAAAGTA AGTTGTACCT TCTGAGC
|
|---|
| Protein sequence | MSRSSCSFAA IMQMNNAALS LVRQGQHARA NRLLQTAMDC LKTELAQPAE DTTVGGMQQS
PGTASLQVVM SIPLPPYPPR VGATLPGFTA TETNTNLPIR YVNNNGHSDS RMETPVANEQ
YNCEDFTSVP HGFFNRAFAV APEDTATGGR RDPFAASVSG TVASATSEEL VILIVILLFN
TGLIYHREGI ATHADRLSTT NYQVSRENNP LLKALVLYDK AIQVAESVDW SKSNSSDTFH
LSTLLAVPYM ALCINKAHIS GEAFLNREQR SHAVHKFSET FRALGPAKNI LTPEESAFFF
IESWFVSVGW NHFAGAA
|
|---|
| |