Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41628 |
Symbol | |
ID | 7199456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011700 |
Strand | + |
Start bp | 154825 |
End bp | 155883 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | |
GC content | 59% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185570 |
Protein GI | 219130856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0459535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACCT CTGCTCACTT CAAACTGAGC GACTTTCCTC ACAAAGTCCT GGATCCGATT GCCACCCTCA CCGTCCCACC GACTTACGCG ACCATCAAAC ATGCCCAACG TCAGCTCATG ACCAACGCAG CCGCCATCCC CACGCTCAAC GGTGGCGGCG CCCACGGCCA CATGGCCTTA ACCCTCACCG CTCTCGCGTA CGCCGACATC AGCGACGTCC CGTTCGTCAT TCCCGTCGCT CCCCCTGCCA ATCCGCCCCC CGGCGCCACG CAACCCCAAA TCACCGAGAA TAACCGCGTT CACCAACGCG ACGCTGACAT TTACAACCTT TATGTCGCTG TTAACAACGC TCTCCGCCAA CAGCTTCTCG ATGCGATTCC CCGCATCTAC GTACGCGCCC TCGCGCATCC CATGTTCGAG TTCAGCAACG TCACGTGCCT TGACTTGCTT TCGCACCTCT GGACCAAATA CGGTACAATC AAGCCCGCTG AGCTCCAGAA AAATTTCCAG TCAATGTTCA CCCCGTGGAA TACAACAGAA CCGATTGAAT CCGTTTTTCT CCAGCTCGAC GAGGCCATCG CCTTCTCCGT CGACGGTAAC GACCCCATCT CCGAAGCTGC CGCCGTACGA GCCGGCTATG AAGTCATCGC GCACTCTGGC CTGCTCCTCC TCGACTGCAA AGAATGGCGC AAATTACCCC TTGCTTCTCA CACCCTTGCC AACTTTCAGC AGCACTTTTC CCTTGCCGAC GACGACCGGC GCCTTACGGC CACCACTGGT TCCCTCGGCT ATGCCAACGT TCTCGCTGCA ACCCCCTCTC TGACTCCAGC CACGGTTTCC GACACCCTCA GCCTTCCCTT CTCCGCGCTC TCTGTGTCAC AGACTTCCGT CTCCTCTCCG GATATGACCT ATTGCTGGAC CCATGGGACC AGCAAGAACC GACGCCATAC GAGCGCCACG TGCAAGAACA AGGCCCCTGG CCATCGCGAC GACGCGACCG CCACCAACAC TCTCGGCGGA TCCACCAAGA TTTGGACCGC CCCCAAACCC CCCAAATAG
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Protein sequence | MSTSAHFKLS DFPHKVLDPI ATLTVPPTYA TIKHAQRQLM TNAAAIPTLN GGGAHGHMAL TLTALAYADI SDVPFVIPVA PPANPPPGAT QPQITENNRV HQRDADIYNL YVAVNNALRQ QLLDAIPRIY VRALAHPMFE FSNVTCLDLL SHLWTKYGTI KPAELQKNFQ SMFTPWNTTE PIESVFLQLD EAIAFSVDGN DPISEAAAVR AGYEVIAHSG LLLLDCKEWR KLPLASHTLA NFQQHFSLAD DDRRLTATTG SLGYANVLAA TPSLTPATVS DTLSLPFSAL SVSQTSVSSP DMTYCWTHGT SKNRRHTSAT CKNKAPGHRD DATATNTLGG STKIWTAPKP PK
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