Gene PHATRDRAFT_41628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41628 
Symbol 
ID7199456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011700 
Strand
Start bp154825 
End bp155883 
Gene Length1059 bp 
Protein Length352 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185570 
Protein GI219130856 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0459535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACCT CTGCTCACTT CAAACTGAGC GACTTTCCTC ACAAAGTCCT GGATCCGATT 
GCCACCCTCA CCGTCCCACC GACTTACGCG ACCATCAAAC ATGCCCAACG TCAGCTCATG
ACCAACGCAG CCGCCATCCC CACGCTCAAC GGTGGCGGCG CCCACGGCCA CATGGCCTTA
ACCCTCACCG CTCTCGCGTA CGCCGACATC AGCGACGTCC CGTTCGTCAT TCCCGTCGCT
CCCCCTGCCA ATCCGCCCCC CGGCGCCACG CAACCCCAAA TCACCGAGAA TAACCGCGTT
CACCAACGCG ACGCTGACAT TTACAACCTT TATGTCGCTG TTAACAACGC TCTCCGCCAA
CAGCTTCTCG ATGCGATTCC CCGCATCTAC GTACGCGCCC TCGCGCATCC CATGTTCGAG
TTCAGCAACG TCACGTGCCT TGACTTGCTT TCGCACCTCT GGACCAAATA CGGTACAATC
AAGCCCGCTG AGCTCCAGAA AAATTTCCAG TCAATGTTCA CCCCGTGGAA TACAACAGAA
CCGATTGAAT CCGTTTTTCT CCAGCTCGAC GAGGCCATCG CCTTCTCCGT CGACGGTAAC
GACCCCATCT CCGAAGCTGC CGCCGTACGA GCCGGCTATG AAGTCATCGC GCACTCTGGC
CTGCTCCTCC TCGACTGCAA AGAATGGCGC AAATTACCCC TTGCTTCTCA CACCCTTGCC
AACTTTCAGC AGCACTTTTC CCTTGCCGAC GACGACCGGC GCCTTACGGC CACCACTGGT
TCCCTCGGCT ATGCCAACGT TCTCGCTGCA ACCCCCTCTC TGACTCCAGC CACGGTTTCC
GACACCCTCA GCCTTCCCTT CTCCGCGCTC TCTGTGTCAC AGACTTCCGT CTCCTCTCCG
GATATGACCT ATTGCTGGAC CCATGGGACC AGCAAGAACC GACGCCATAC GAGCGCCACG
TGCAAGAACA AGGCCCCTGG CCATCGCGAC GACGCGACCG CCACCAACAC TCTCGGCGGA
TCCACCAAGA TTTGGACCGC CCCCAAACCC CCCAAATAG
 
Protein sequence
MSTSAHFKLS DFPHKVLDPI ATLTVPPTYA TIKHAQRQLM TNAAAIPTLN GGGAHGHMAL 
TLTALAYADI SDVPFVIPVA PPANPPPGAT QPQITENNRV HQRDADIYNL YVAVNNALRQ
QLLDAIPRIY VRALAHPMFE FSNVTCLDLL SHLWTKYGTI KPAELQKNFQ SMFTPWNTTE
PIESVFLQLD EAIAFSVDGN DPISEAAAVR AGYEVIAHSG LLLLDCKEWR KLPLASHTLA
NFQQHFSLAD DDRRLTATTG SLGYANVLAA TPSLTPATVS DTLSLPFSAL SVSQTSVSSP
DMTYCWTHGT SKNRRHTSAT CKNKAPGHRD DATATNTLGG STKIWTAPKP PK