Gene PHATRDRAFT_31375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31375 
Symbol 
ID7199436 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011700 
Strand- 
Start bp145543 
End bp146267 
Gene Length725 bp 
Protein Length168 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185588 
Protein GI219130893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.332386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCACAATGGT GGCGGAACAG TCTTCACAGG TTATCGAACG ACTTGGACCA CTGTTCAGTT 
CATAGAGTAT CTCGCATTCT TTCTTGGTAT CCCCCCACCC AATCCAATTT CTTTCCGATT 
ATCAATAGCG CCATGGGGAA CAAGATTAGC CTAGAGGAAG AGCTCGTAAA CTTGCGGATT 
ACGAGCAAGC AAATGCATCG GTCGTCCAAA AAATGTGAGA AGAACGAAAA GGCAGCTTTG 
GAAAAGCTTA AAAAGGTAAG ACAAAGGAAA TCCACCAAAA GCTTGATTCA GCCTGCAGCC 
TTTCCTTATC AATGGGACTG ACGCTAGGTC GACTCTTCGA ACAGGCGATC CAACAAGGAA 
ATTCCGAAGG AGCTCGGATT TACGGTCAAG ACGCCATTCG CGAAAAGAAC CAATCTCTTA 
ATCATTTGCG GATGGCATCG CGCTTGGACG CTTGCTGTTC ACGAATCGAA ACAGCAGTCC 
GTATGAATGC AGTTTCGGAT AGCATGAAAG GCGTTGTAAA AGGAATGGGC AGGTCCATGG 
CGAGTATGGA TATTGAGAAA CTCAGCTCCA CGATGGATAA ATTTGAGCAG CAGTTTGAAG 
ATCTTGATGT CAAGACGCAG TACATGGAGG GTGCTATGAA CGCTACTACA GCGACATCGA 
CACCTGCGGA ACAAGTCGAT GAACTTATTG GGCGAGTGGC GGATGAGAAT AATCTCGAAT 
TGGGA
 
Protein sequence
MGNKISLEEE LVNLRITSKQ MHRSSKKCEK NEKAALEKLK KAIQQGNSEG ARIYGQDAIR 
EKNQSLNHLR MASRLDACCS RIETAVRMNA VSDSMKGVVK GMGRSMASMD IEKLSSTMDK 
FEQQFEDLDV KTQYMEGAMN ATTATSTPAE QVDELIGRVA DENNLELG