| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_52750 |
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| Symbol | UPL1 |
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| ID | 7199388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011699 |
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| Strand | + |
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| Start bp | 127320 |
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| End bp | 127820 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | ubiquitin-protein ligase 1 |
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| Protein accession | XP_002185487 |
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| Protein GI | 219130680 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAACT CATTCGTGGA AGGACTTGCC AACGTAATTC CGTACGAGAT TTTGCCTATT
TTTTCCGGTG AAGAATTGCG GGATGTGCTT TGTGGGAACC CCGAGGTTGA GGTCGACTTG
CTGCGTCGTG TTGTTGAATA CGAGGGCTAT GAAGCCAGCG ATCCGGTGGT CGGATACTTT
TGGGAGACTC TTCGATCAAT GACGGATAGG GAACGCAAGA CCTTTCTACA ATTTGTGTGG
GCTCGGAGTC GCTTGCCGAT GCGGGAGTCT GACTTTGAAG CTCCCTTCAA GCTACAGAAG
GATCTGGTCA ACGTCGGTGA GAAAGCGGAC CTTGCTTTGC CTAGCGCATC TACTTGCTTC
TTTTCGCTGA CGTTGCCCGA ATACAGCAAT GCAGCCTTGC TGAGGGACAA GCTCTTGTAC
GCAATCAACA ACGTGACAAC GATGGAAACC GACTTTCAGA CGAACAGCGC AGAAATCGCG
GAAGGGTACC GTGCGTTATA G
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| Protein sequence | MLNSFVEGLA NVIPYEILPI FSGEELRDVL CGNPEVEVDL LRRVVEYEGY EASDPVVGYF
WETLRSMTDR ERKTFLQFVW ARSRLPMRES DFEAPFKLQK DLVNVGEKAD LALPSASTCF
FSLTLPEYSN AALLRDKLLY AINNVTTMET DFQTNSAEIA EGYRAL
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