| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50588 |
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| Symbol | |
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| ID | 7199368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011699 |
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| Strand | - |
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| Start bp | 240266 |
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| End bp | 242873 |
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| Gene Length | 2608 bp |
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| Protein Length | 698 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185545 |
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| Protein GI | 219130801 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.106084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCGTTCGTG CAGGATTCTG TCAACAATCT CGCGTTCGTC ACGGTAGCTG TCAGCATCTG
TCATCGACAA TCGTTCACTT CCGAGTCCGT TTTCGGCTTT GAAACTTTCA GCATTTCACC
AAAGATCCTC CATTTGTCCC GTACGAAACA CTCTTGGTGG TTACGTTTCT ATCCTTCCAA
CAGAGAAGTG CTTGCTACGC AATCTGTAAT AGCTCCGTTT CCAGGCAGAA CACTTTCGAC
TCTGAGTTGT CGGGATCTAT CGACGGACGG AAGGAACATC CATACACGTA TCGCATTTAC
GTATCAAATA CACGTATCGC ATACACGCAC CCGTCGTCGA CACGAAAATG ATGAACGCGT
TTACTACGGG ACCGGAGTCA ACTGCTGCCG ACCGCCACAA CAGACGCGCC ACGGGAATTT
CTTCCGAGGC AGAAGAACGC CGGATGGAAA CCTTGGAAAT CATGAACACA CCAGTCGAAA
ACGATGCGGA AGAGGAGAAT GATGATGACG ACGACGAAGA AGAAGAGGCG CTGGCGCCTG
TTGCTGGATG GAGATTCTGG TGGATCTTTG CCAGGTTTCC GTTGGGTCTG CTCCTCGTTA
ACACTATCCT TCTCGCTTTA ATCACCCTAT ACAATCCACA ATACTCGCCC TCATATATTG
TGGGAAACTC GACGGACGTT GAAATGAACG ACGCCTTCGA TTCCGACGAG CGAAGGGATT
TCGGGCTTGC GCAGTTCAGT GCGCTCGAAC TGCAATCATG GATTGTCAAA TGCGGGATGG
TAGCCCTCTT AGCTTGCCTG GATGCTATTG TCTTTTACTG GTTCACAGTA CGTCTCAAGA
AGGGCATGGA ATTGCTTGCG CAAAAGGCTC AGCAAGAAGA GCCTCAAGGA CGGCCAGTCG
CAAATGAGAA TCTGAACAGG ACAAGAACGG CACCGTTGCA CAAGTTGGAC TTGAACTACA
GCGAACTGGA CCTGGTACAC GCTCGGGTGA CCCAAAAGAT AGACTCGTAT CTATTTAGGG
ACCCAGCGCG GCAACCGACC GTCCCAATCT TGGTCAGCCT GTTGTACCTA CTGACGGCAC
TCACAGTGAC TGCTTGTCTG ACTACGCTAT CACTTTTGAT ATTTTTGTAC AGCTCCGAAG
GATCTTCCAT GTGCTTGGAG AGCATCACAT CACAGTCAAG TGAATCCGTG GAATTTGATA
TTGACTCGAT TGAAAATATC CCGCAAGAGT TACAGGAATG GGCAAGTCCG AGATATTCAT
ATTCTGATGG ATCATCATAC ATTCATATGA GTGACGGAAC TACTTACTTT CGCGGTAGAA
TGGCCGAAAA GGAACATCAT GGTTGGGATT CCTATATGGA TACGGAAACA CTAGTTGCGA
CCAACGTAAA TGGAAATCTT ACTGTGTACA GTCAACTCCA CGAACCGCAT AGCTTCGTGA
GTATTAACGA AGGTTCTGGT GAAACAATGG AAGGATTCTG TTTCCTCTAT ACGGAGTTTG
CTGGACACGA CGACGAGGAA ATATATGAAT ACAAAAAGCA AGCAGTTGCA TGTGTGACAT
CAGATGAAGA TAAAAGTCAG GGATTTCGAA ACGCAACTCT TCTAAACAGT GACAAATGGA
ATCGGATTAG ATGGTCCGCT GGCAAAGCTC ACGATGGACG ATACTGGATC AGGCTGCAAG
AGGATAGATT TGTTGATGAG TGGTCGTCGT ATCAAGAGGT TTTGCATATC ATACAGCTGG
ACCCGCAGTC GATGATGTAT ACTATAGTTG CAAACTCAAC TTCCTTCCCC GATTTTCAAC
AACCCTTGAG GAACGAAGGA AGTAGATGTT TCCGCTGGAC TAGCGGCATT GGGTTCGTTG
CTGCCGCAAT ATCTCTGTTT CTTTCGGCGC TGGTGCTCCT ACTATTCATC AAGACAAAGT
CGGGAGCAGG TTGCTTGGCG TTGTCTATCT TTGCAGTCCG ACTTTGGCTG GAAGAAACTT
GGCTCGACGA AACTTGGCTA GACATGCTGA GTCCAGTATT GCTTGTTTTT ACATTCATAT
GCTTGTGCAC GGCATCACTC AGCCTTGCCG TCCGAGAGAT GTTGCTATGG GGAATGTATA
GTGTCATTGT GATGCAATTG GTTTTAGCTA TTCAATTTCA GGTAATGGGG ACTATTGGAC
TAGGTATGGG CCTCGCGCTG GACCATCCTG TACTTCAGCT GGGTGGATGG ATTGGAGGAC
CATTTGCTGT CTTTCTTCTT TTGTTCTACT CAATCACTGA TTCCATTGAT TGGTTGGAAC
TGGTGGCGTT TATTCCATTG AGTGTCCTTA TTGCTTGCGG GATGGTGACG GCAGGGAATC
AACTCACAAG ATACCGCCCA TTTCTGCTGT TCTACCTGAG GCGTTTGTGG CGATCGCTTT
GCCTGAAAAT ACGGCCGCAA ATTCGACAAC AAAGCAGAAG CTGAGAAATG GACTTTTATA
CACAGATTTA AAGGCATGTT GACTAGCTGC TGACTGTGAG ATTCTATTTT TACGTTGTAT
CTTGTGGACG TCGAACAATC CATCACAGTC ACCACTAAAA CTCGGCAAAC CATAATCACC
AAATCTTAAT GAGTATTGCT TTACTTGC
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| Protein sequence | MMNAFTTGPE STAADRHNRR ATGISSEAEE RRMETLEIMN TPVENDAEEE NDDDDDEEEE
ALAPVAGWRF WWIFARFPLG LLLVNTILLA LITLYNPQYS PSYIVGNSTD VEMNDAFDSD
ERRDFGLAQF SALELQSWIV KCGMVALLAC LDAIVFYWFT VRLKKGMELL AQKAQQEEPQ
GRPVANENLN RTRTAPLHKL DLNYSELDLV HARVTQKIDS YLFRDPARQP TVPILVSLLY
LLTALTVTAC LTTLSLLIFL YSSEGSSMCL ESITSQSSES VEFDIDSIEN IPQELQEWAS
PRYSYSDGSS YIHMSDGTTY FRGRMAEKEH HGWDSYMDTE TLVATNVNGN LTVYSQLHEP
HSFVSINEGS GETMEGFCFL YTEFAGHDDE EIYEYKKQAV ACVTSDEDKS QGFRNATLLN
SDKWNRIRWS AGKAHDGRYW IRLQEDRFVD EWSSYQEVLH IIQLDPQSMM YTIVANSTSF
PDFQQPLRNE GSRCFRWTSG IGFVAAAISL FLSALVLLLF IKTKSGAGCL ALSIFAVRLW
LEETWLDETW LDMLSPVLLV FTFICLCTAS LSLAVREMLL WGMYSVIVMQ LVLAIQFQVM
GTIGLGMGLA LDHPVLQLGG WIGGPFAVFL LLFYSITDSI DWLELVAFIP LSVLIACGMV
TAGNQLTRYR PFLLFYLRRL WRSLCLKIRP QIRQQSRS
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