Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50582 |
Symbol | |
ID | 7199363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | - |
Start bp | 188474 |
End bp | 189651 |
Gene Length | 1178 bp |
Protein Length | 372 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185539 |
Protein GI | 219130788 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGGC TAGCAAATAA AAGTCGCATG TACGTTGCGC TGATTGCCTT GTGTTTCTTA GCGTGCCTAC AATGGAAACG GCTGTGTCTC GCAGGTCGGT CCGGGATTTT CGCGGAGGTG AAAAGCCTTG GGCTGCCGTA TGGAGAAAAA GATTCCAGCG TTCCGGCTTA CCACGACAAG GCGTGCTTGG ACAAAAAGAA GATCCTAGAG ATTTTGCTTA ATGGTGGGAA AAACATATCG CAAATTGATT GTGCGTTACT CCCAGTATGG CAGAATATTG TCGAAAACTA CGGAGACGGA CCGGTTGTCC ACGGCCTCGA CACTTGCGAG GCCTACCGAG AGAGCATCTC CAACAATTCT CATCCAATGC TACGTGTGGC TGGACTGTTC AATTCTGGAA CTAACGCTAT GGCAGCTCTA TTAGAGCTCA ACGTGGAAGA ATTGGGGGGA AACTTTCAAC ATGAAGTACC GTGGGGGAAG CATCTACCAG TACGGTTTCG CAAGACCAAT AAATTTCCGC CAAGATCGAA AGTTGACTAC CGACAAGTTA TGCCAGTAGT GATGGTGCGG GAACCGTTCC GGTGGATGAA GTCTATGTGC AAAAGGAGTT ACGGCGTTGA ATGGATAAAG CCAAACAATT TTAGTCACTG CCCGATTTTG ATTCCCAATG CTCACGATAA ACTGAAGCCC CGCTTTCGAG GAAAGAAAAC GGCAGAGACC AAGGTCGGTC TTAACCAAGT GACAAACACG GTCCCCATTC CTGTAGAGCA TTACGATTCG CTTGCTAGTG TATGGACAAC GTTTTATCAG GATTGGAATG ATGTCGACTT TCCGCATCTG GTCGTGCGAT TTGAAGATAT ACTCTTTCAT GGTCCTCGAT TGCTAGAAAT TTTGAACGAC TGTATTGGCA TGAACGCCAC TCAGAAGCCT TTTCGTCATA AGATGACACA AGCCAAGAAA CACGGACGGT CCTCTGATTT TGCAACGGCT CTTGCACAAT ATGGACCCGG CTTTCAGAAA CTTCGTGGCC TCACACAGGA CGATATAAAC TTTGCTAGAG TCGCTTTGAA CTCCTCCTTG CTGGAAACCT TCCATTACCC GGCTGTACCT TTGTTCTAAG CAAATACGGG ATTTTCACCG ATCCGATTAA GTATTGTTCT AACTGCTCTT GCATTGCG
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Protein sequence | MQRLANKSRM YVALIALCFL ACLQWKRLCL AGRSGIFAEV KSLGLPYGEK DSSVPAYHDK ACLDKKKILE ILLNGGKNIS QIDCALLPVW QNIVENYGDG PVVHGLDTCE AYRESISNNS HPMLRVAGLF NSGTNAMAAL LELNVEELGG NFQHEVPWGK HLPVRFRKTN KFPPRSKVDY RQVMPVVMVR EPFRWMKSMC KRSYGVEWIK PNNFSHCPIL IPNAHDKLKP RFRGKKTAET KVGLNQVTNT VPIPVEHYDS LASVWTTFYQ DWNDVDFPHL VVRFEDILFH GPRLLEILND CIGMNATQKP FRHKMTQAKK HGRSSDFATA LAQYGPGFQK LRGLTQDDIN FARVALNSSL LETFHYPAVP LF
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