| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50576 |
|---|
| Symbol | |
|---|
| ID | 7199399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011699 |
|---|
| Strand | - |
|---|
| Start bp | 173202 |
|---|
| End bp | 174595 |
|---|
| Gene Length | 1394 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185536 |
|---|
| Protein GI | 219130782 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAACTATGGA GCGAACAACC TCTCCCTACG TTTCTCTAGT GGAGCCGGCA CAACCGAACG
CATACCATTT CTCTCTTTCA AACTTCCTTG CAGCTCTGTG TTTCGGCTTG CCGAAAGATA
GAAGAATTGT CCACCATGGA TGGCCCTCCC TCCTATATCA CATTCGATCG TCTTTCTCTG
AAGCAGACGT TCAGACGAGT CTGTGATATC TTTGTTGATC GCTACGACGT GTTCTTGCCC
CTATCAGCAA TTTCCATGGT TCCATTCCTG TTGATAATGA TTACCACGGT GGAAGTGGCC
GTTTCGTACG TGATGCAATT CAACGAACAA GGCGATGTAG ATTTTGGCAA GCACGTAGTC
GGATTGACCA TTATCTTCGC GATTGAAACG ATAGCGTATT TGGTAACAAC CATTATTGGG
CAAGCTGGGA TGATACGAGC CGTAGCTGAA ATGTACTCGG GTAGGCAGCC TAACTGGTAC
GCGTGCTTCC AGCGAGCTTT ACCGCACTTT TGGTCATTGC TCGGTGCGAG CTGTCTCTAC
GGTTTAGCCA TTCTTCTGGG ACTCCTAGTC GTACTTCTGG TCCGAGCTGC GGTGTTCACC
TTTTTGACGA AGAACGCGAC AGTAGGTATT TTTGTTATTT CCATTCTGTT GAGTTGCTTT
GCTGCTTTTG TTCTTTACCT TTCGGTTTGT ATGACTCTAT TCGTCCCTGC TATTGTGATT
GAGAGCAAAT CCGCAGTTGC CGGAGTCAGG CGGGCCTTTG AGCTTGCTTC TTCTCGGTGG
TGCTACGTGT TTTGTTATGT TTTCATCTTC ACTGCGGGCT CAATGCTCAT TAATGGAGTA
GTCAGGCGAG TTGTCGGCGG GGGAGATCCG ACACATCCAT CCGCGATGAT CATGGGAGTG
ATAGTATCAT ACTTTCCACA AGTGTTCCTC CTGCCCTGCT CCAACATGTA AGTAACGTCT
TCGGCATCTT TTGATCTGGA GTCTTGGGCA ACCAGGACGT TTTTCTGTTT ATCGCAAAGT
CCTAATCTTT TCTATAACAG TCTGCAGACT GTCCTGTACT TCAATCTGCG CATCGACAAG
GAGAGTATGA ACGCGGAGAT TTTGGCCCTG GACATGGCAT CATCGGCATT GCGAGAGGAT
GAACGACGTC CGCCCGCTCC TTCCAACTAT CGTGAAATTC CTTTGTTGGA CGATGACGAC
CGAGTGGAAG CTCCGAGTCA GGTAATCCCT GCAACCGAGG TTGTGTGAAA TTCGACAACT
CATCAAGGAA TTGGAAGCCA AGCAAATATT TGTCAAGTAC CGGTTCCTAG AAAATGAATC
TTTCTTGTGC TCGGATCTCG TAGTGGACAA CAATTAGTTA ATATAGAAGA AGGCTAAACA
GTCTATTTTC ATGT
|
|---|
| Protein sequence | MDGPPSYITF DRLSLKQTFR RVCDIFVDRY DVFLPLSAIS MVPFLLIMIT TVEVAVSYVM
QFNEQGDVDF GKHVVGLTII FAIETIAYLV TTIIGQAGMI RAVAEMYSGR QPNWYACFQR
ALPHFWSLLG ASCLYGLAIL LGLLVVLLVR AAVFTFLTKN ATVGIFVISI LLSCFAAFVL
YLSVCMTLFV PAIVIESKSA VAGVRRAFEL ASSRWCYVFC YVFIFTAGSM LINGVVRRVV
GGGDPTHPSA MIMGVIVSYF PQVFLLPCSN ILQTVLYFNL RIDKESMNAE ILALDMASSA
LREDERRPPA PSNYREIPLL DDDDRVEAPS QVIPATEVV
|
|---|
| |