Gene PHATRDRAFT_50561 details

Gene Information

• Locus tag: PHATRDRAFT_50561
• ID: 7199389
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011699
• Strand: +
• Start bp: 128961
• End bp: 131228
• Gene Length: 2268 bp
• Protein Length: 575 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002185488
• Protein GI: 219130682

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACACAAAAAG AGGTTCCTAC CGCCCATTGT ACGAATTACG TAGTTATGTA TACAATTGTC 
AGTCACCATG AATCTAACTG TAAGTTTACA TTGCGCAAGG CAAACGTGTA GCTTTGGACG 
TGTGAAATGG AATCCTGAGA TAGATAGATA GCTACCTGCA ACGTCGGGGA AGACAGGTTT 
GGTTTGTGGC CTTTCGTCGA GTCGTTTCTA CAGAAATATG TGGAAAACGA GTGCCATGTG 
TATCGGGAAA GAGCCCCTTT CATAGGCCTT TTGGACCCTT CTCCAAAGCC TCGACTGTGA 
GGGAATTGTG TTCGTCCGTC GTGTATCTCG TCGCTCTCTC TCTCTCTTGT ATGTACATTG 
GATGGGACGG AATCAAAAAG GATACCCCCG ACCTGCCCGA GTTGTCCGTC TCGATCCTTG 
TCTTTGTTGC GCTCTCTCTT TCTCACCCGG ACACGGATTC ATCTATCTCT CTATTCATCC 
CTCCGTTTCG TTTCTGTTTC TTTTTCGATT GCTAAAACAG ACTAATCCTT CAGGGACTGC 
ATACGACGCC ATGACCGCCG CCAGACCCGA GCCTCACTCG CAACACAATC CCCGCACCGG 
TCGCAAAGGC GACCCGCGGA TGCACCGAGC TGTCGCAGCT CGATTGAACG ATCCTAACCT 
CAGTCTTTTT GACGCCTTGA CAGCCGGAGG CTTTACCTAC CCGACGGACG AGGACGCCAA 
CTACATGGAC AGTGAACAAG TCACGCTGGG ACAACGCAAG AATCAACTCT CCCGAAGACT 
CCGACTGGCA CGCAAGCAGA CGACGCGTCA CTCACCCCAC CACGAGAACG ACGAGAACTC 
CTCACACAGC TCGACGTCGC ACGGAGGCAA ACGCTCCCGA CCCTCCGACG AAAATGGACA 
CCACGGGGTC TCTGTACGGA AAAGGAATGT AGATCCCAAC GACCCAGCCT CGCTACAGAA 
TGATCAGCAG CAAATAATGC TGGAGGAATT GAGTGTGGCG ACGGCCGAAG CGGAAGAAGA 
CCGTCCGCGT CTCATGGCGA AATTCCATCC CCAGTATCAT CCCATACTCG TGCCGAGGAT 
TGGAAATCAT CACCATCCGA TGTGCTCGTC GGCGTCGAAT ACGAATAACC CCTCTACGTC 
GTCACGGCAC AATCCTTCCG CGACCAACAC GCATTTGGGA AACAGCGACA TGCCTTTCGC 
CACCAGCAAC AATCGATCCA CGTACGAGAT TCACTACCCT CCCGAACGCA ATAACGATCC 
CACGGCACCA TCGGGCGTCG CCATTGCGAG TCTCAACTCC ACCGCCCTCA GCCTCGGTAT 
CACACTCGAG CAACTCGCAA TGACGCTGAA TAGTACCAGT ACGCTGGCTA AAATCATCAA 
TGGGGACAAC AACACCGCTC GGCAGAAAGA TCTAGCCCTG CATTTGTACC AGAACAAAAA 
CAAGGTGTTG TACGAAAAGT CCATGGTCTT GGCGGGGTAC CCAATGTCGG ACGCCCGGGA 
AGGCTCGGCC AAGCACCTCG AGTTCGCCTT TGACGCCTGG AAAATTGAAG GCCAGCGTCT 
GCAAGCGCTC GCGGCGGATC GACAAGCTGA AGATCCGCCA ATGGAAGCCA AAACGGGATC 
ACCGCAGCCC CATTCTGTCG CTGGCATATC CCGTTTGAGT CAATCGAGCC GAACCGAATT 
TAAAAACCAC AGCAACATAG ACCCCGGTCG TACGGCGCAC AAGAATTCGT CGACGAATGG 
TCACCAACAT CGTCACGCGA ACGAATCGGA ATGCGGACTC GATGGTAGGC ACATGCATCG 
TCTGGAAGGC AAGTGCGGTC ACAAGGCCAT CCTGCATAAA ATGCCGGACG GGAGTGCTCA 
CATTGACTTT GTTGTCGGTG ACAAGGTTGA ATGCTACCAT AGCGTGCAGC CGGCACGGAG 
TGGCAACGGC GGGAATCGCC TTAGTGACAT GTGGCCGTCC AAATATTTGT GTGAAGATTT 
AAATTGTCCA AAGCACTGTA ACAATCAAGC TTTACAGCAC CAACAGCACG GAAATGATTG 
TCAAACTCTT ACCGCATCCA AGATTTTGGA TTTAGAATCC ATCGATTTAG ATGGGAAGGA 
ATGGAGCACC GATTTTACGA ACGACGACAC CAACAGCTTA AGGGCATTGC TCAACCTCGG 
CGATTCGGAT ATAGGTCGAT CGCGGACTAC ATCCGTGGAC GACGGCCCTA CTACGAACGA 
GCTTTTGGAA ATTTAAATGA TAAGAATCAA TGCAATGTAT TTCTCAAC 

 

Protein sequence

MNLTTNPSGT AYDAMTAARP EPHSQHNPRT GRKGDPRMHR AVAARLNDPN LSLFDALTAG 
GFTYPTDEDA NYMDSEQVTL GQRKNQLSRR LRLARKQTTR HSPHHENDEN SSHSSTSHGG 
KRSRPSDENG HHGVSVRKRN VDPNDPASLQ NDQQQIMLEE LSVATAEAEE DRPRLMAKFH 
PQYHPILVPR IGNHHHPMCS SASNTNNPST SSRHNPSATN THLGNSDMPF ATSNNRSTYE 
IHYPPERNND PTAPSGVAIA SLNSTALSLG ITLEQLAMTL NSTSTLAKII NGDNNTARQK 
DLALHLYQNK NKVLYEKSMV LAGYPMSDAR EGSAKHLEFA FDAWKIEGQR LQALAADRQA 
EDPPMEAKTG SPQPHSVAGI SRLSQSSRTE FKNHSNIDPG RTAHKNSSTN GHQHRHANES 
ECGLDGRHMH RLEGKCGHKA ILHKMPDGSA HIDFVVGDKV ECYHSVQPAR SGNGGNRLSD 
MWPSKYLCED LNCPKHCNNQ ALQHQQHGND CQTLTASKIL DLESIDLDGK EWSTDFTNDD 
TNSLRALLNL GDSDIGRSRT TSVDDGPTTN ELLEI