Gene PHATRDRAFT_50537 details

Gene Information

• Locus tag: PHATRDRAFT_50537
• ID: 7199375
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011699
• Strand: +
• Start bp: 49394
• End bp: 54022
• Gene Length: 4629 bp
• Protein Length: 879 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002185477
• Protein GI: 219130659

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.437528
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAACGCTTC ATTCAACTGA TTGATTACCA ATCAACGATC CAAACATTGG GGTAGACAAT 
CTTCCGCTGC TGCTTTTTAC GATGACAAGA TGGGATAGCA ATCGACGTCA AGTGTCATCG 
ACGCTTTTGC TGTACTGCGC GGTATCGTGT GAGGCATTTT CCGGGTCGTT CTACACGCAC 
ACGCAGCCGT CCGCACCGAC ACGGCCATCC TTTGTCGGAA CGAGGAGTGC CGGTACACGT 
TTGTTTGCCA AGAAGAAGAA GTCTCCGGCA GCAATGGCTC TGGAAAAGCT GGACAATCTC 
TCCTTTTTGG ACGAGGAAGT ACCCTTGTCC AAAAAAGAAC AATTGCAACT GGAAAAGAAG 
CAACAGAAAT TGGTGAAACA GCAGCAGGAA CTGCAAGCCA TCGACGCTGT GGAAGACGAA 
TCTTCTGCTA AAATCAAGAC GCCGGTTGAA AAGCACGCCG CACAAGGCGA TAGTGTGGAG 
TTTCAGCCGT CACAACCAAA GAAATTGAGT AAAAAGGAAG AAATGTTACA AAAGGCGCTC 
GAGTTAGAAG CTGCCGATGA AGCCAGTGCG AACGCTATTT CTTCGGATTT TGACGAACCT 
CAGCTATCAA AAAAAGAACT CAAGGCCTTA CTGAAAAAGG AAGAGAAAAT GGCGGCCAAA 
CTTGAGAAGA AAATGGCCAA GAAACAGCAA GTCGTAGACA ATGACGAGCG TGACGAGAGT 
CTGACTGCAA CAGATGCAAC GGTCGACGAT GAAATTTCGG TAAACATGGA TGTAAACGAA 
GTCTTCAATG GTGAAGAGAC AGATGAGGAA GCCCCGAAAA TTAGGTTGAG TTTGGAGGAC 
AAGATTCGCA AAGAACGACC GCCGCCAAGA ATTCGTGTCA TGGAAAGCTC ACAGCCTGGT 
TACCAGTCTC TCCGCCTCGA AGATATCGGA ATTACCTTTC GCAACCAAGA AGTCTTGAAA 
GACGTGACTT GGGGTGTGCA AACTGGGGAT CGAATTGGAC TGGTCGGGGC GAATGGTGCT 
GGGAAAACGA CACAGCTACG CATTTTGGCT GGCGAACTAG AACCTACGAC CGGGGACGTC 
GTCAAGTCGA GCAAGGATTT GCGAGTCGCC ATGCTCCGAC AAGAATTTAT CGATGAGCTG 
GTTCCGGAAC GCACCTTGCG AGAAGAGTTT CTGAGCATTT TTGGAGTAGA AAATCAAATT 
CTGGAGGATC TCAAGAGTTC GGAACAGGAA CTCGAGAGCA CCCCGCCGGA AAATTCCGAA 
AAAATGCAAG AAATTCTGGA TCGTATGCAG GAACTCCAAA ATAAGGCAGA AAACAAGGCT 
GTTTATGCGC TGGAGTCTCG TGTGCAGAAA GTTATGGACT TGATGGGTTT CACGGATGAT 
GAAACGGAAG ATCTGGTTGC TAGCTTTTCT GGTGGCTGGA AAATGCGCAT TGGACTCGGC 
AAAGTTTTGC TTAAAGATCC AAATATCTTA CTGCTTGATG AACCTACCAA TCATTTAGAT 
CTGGATAGTG TGGAATGGTT GGAATCGTTC CTGCGTCAGC AAAATATTCC CATGGTGATT 
GTAAGCCACG ATCGCGAGTT TTTGGATCAA GTCTGCACCA AAATCGTCGA CGCTGAAGGT 
GGTATCTGTA CCGAGTATGA GGGCAACTAC TCGCGATTCC TGCAGCTGAA GAAAGCCCGT 
ATGGACGCCT GGCAGGCGGC GTACGATGCT CAGGAAAAGA AAATCAAAGA AGAGCGCAAG 
TGGATTCAAA AATTCAAAGT AAAACAACCG CAGGCTGTAA AGCAGCGCCA AGCCAAGCTT 
GAAAAACAAA TCAAGAGTGA CGACTATGTC AAGAAGCCTC CATTTGTCGG CAAACCTTTC 
CGGTTTCGTT TTCCGGACGC ACCTCGTCTA AGTCCAGAGG TAGCCAATGT CAAACATTTG 
TCTCACGCAT ATCGTAACGA ACAAGCTCAG AATCGTTTGT TTGAAGATTG TGAGCTCTTT 
ATTGAGAAGG GCGATCGGAT CGCTGTACTC GGGCCCAATG GTTCGGGCAA GTCGACACTT 
TTGCGATTGT TGGTTGGTCG AGAGAAGCCC GACGATGGGA GTGCCGAAAT CATAGGACAA 
AATGTGATAA TGAACTATTT TGAACAGAAT CAAGCGGACG CACTTGATCT CGACAAAACT 
GTGTTGGAGA CAATACAAGG CAACAGCAGT GGTCAGTCCT ACAACGAACT CCGAGCGCTA 
CTAGGACAAT TTCTGTTCAA GGGAGATGCA GTCGACAAGA AGATTGAATT CTTGAGTGGA 
GGAGAAAAGG CACGGCTTTC TTTATGTTGT ATGATGCTTC GACCGGCCAA CTTGTTGATT 
TTGGACGAAC CGACCAATCA TTTGGATATT CCGGCGAAAG AGATGCTTGA GGAAGCTCTG 
CAACACTTTA TGGGTTCAAT CATGGTTGTA TCCCACGATC GTTACTTTAT TTCCAAGGTC 
GCTACTTCCA TTGTAGCGAT TGAAGATCGC AAGCTGGCCA AGTATCAGGG CGATTACAAG 
TTTTACATGG AGAAGAGCAC GCACATCAAG GAAAAAGTGG AAGCCCGGTA CGTCAGTGGT 
GTAGATCGTA TCGAATCGGC ACCCATTATT GATCTGGAAG AAATCGTCAA GCCGAAAAAG 
AATTTTGGTG GAGCCAAAAC AGCCGGCTTG GTAACGAGAA AAGACAAGGG TATCAAGAAT 
GCTAAGCGAA TGAAAACTTA AACTGCACTA ATAGAATCCC AACCATTGCT GTGGATGAAA 
GTATGGACTT GGCTATGATT AGTTGAAAGA CTCGAAAAGA GAGTTTTTGC AGCAGCTTCT 
AAGGGTTGAT TGAAGTAGGT TTTGTGGGTT CGATGCTTGT CGATTGTTTC CAGTTATACT 
TACGCACGAA CAGGCAAGCG TTCGAGCGCG ACTTTACTGT CCCATCCATG CGGTTGTTCG 
AAAGTTTTCT CCCGGGAAAG TCACCTTGCC TGCTTCCAGT TCGGCCTCGA TACGCAAGAG 
TTGATTGTAT TTGGCCAAAC GTTCCGATCG GCAGGGCGCG CCCGTCTTGA TCTGTCCCGT 
GCACAATCCG ACGGCTAAAT CAGCAATGTA GGTATCTTCG GTTTCGCCGG AACGGTGAGA 
CGTCATAACA CCCCAACCTG CTTTTTTCGC CTTGGTCACG GCAGCGATGG ATTCGGAAAT 
GGAACCGATT TGGTTTACCT TGAGCAACAA GCACGTGCAG GCCTTTTCGT CAATGGCACG 
TTCAATCTTT TCAATGTTAG TGACGGTCAA ATCGTCACCA ACCACTTGGA AGGTGGCACC 
ATTCTTGGTT GTAAATTTGG ACCAGTTCTC CCAGTCGTCT TCGTCAAAGG GGTCTTCGAT 
GGTGACGATG GGAAAGTCGG CTGCCAGCGA CTGGTATAAA TTACCGAGTT CTTCTCCAGA 
TACAATGTCA CCATCGTACT TGAAGTCCAA ATCGTATTCA TCTTTGCCCT TGACTTTAAA 
CTCGCTCGCG GCAACATCGA GACCAATCTT GCATTTACCA TCGTATCCGG CCTTGGAAAT 
TGCTTCCATG ATGAGTTCAC AGCCTTCGCG GTTGTCACAT GGCGGAGCGA ATCCACCTTC 
GTCGCCAATC AGAGTCGCGT CGCCACCAAA CTTGGCCTTG ATGATTTTCC CCAAGGTATG 
GTACACTTCG CAACCAATCT GCATGGCTTC GGCAAATGAT TTGGCACCCG TCGGGATAAC 
GAAATATTCC TGAAAGGCGA GTTTGTTCCC CGCATGGGAG CCTCCATTAA TAACGTTGAA 
GCAGGGGACG GGCATAGTGT AGGTGTCCAG ATTGTTGCCG GCTAGATCGG CAAAATGCCG 
ATAAAGGGGG ACTTTCTTCG CGGCGGCTCC GGCTTTGGCA ACGGCAAGGC TGACCCCCAA 
AATGGCGTTG GCCCCGAGGT TGGCCTTGTT GGGTGTTCCG TCAAGTTCCA GCATGACGTC 
GTCGACGGAT CCCTGTCCGA CCGGATCCAT ACCCATGACG GCTGGTCCGA GTATGTCGTT 
GACGTTCTGT ACGGCCTGGA GGACACCCTT GCCCATGTAG CGGTCGCCGC CATCGCGCAG 
CTCGACAGCT TCGTAGGCAC CGGTGGAAGC CCCGGACGGT ACCGACGCGC GGAAGACTCC 
GTCGGCGGTC GTCACTTCGA CCTCCACGGT AGGATTGCCG CGGGAATCCA AAATCTCACG 
GGCGAGAACG CCCGTGATGC CGGACATGGC GAGTGTAGTG ACGGAGGACG AAGCCGAACC 
CCGCGTGGTA CTTGTCAAAG AAGTCGTCGT CGACCGTGGA GCAAAGGCTA GCGTGGTGCC 
TGTAAAGTAG ACAAACGTGG TGAGTGAGAA CAGTGTCTGT AGGGCAAGCC GTCGTTCCGA 
TAGACAAGAA GATGTCGTTT GATTCGATGA GAATAACCAC CGTTCGGATC GTTGGTGCTA 
TCCGATCCAC ATGGAACGAC TCCATCGGCG CTGCGGCTTT TCGACGCGTC CGTTATGCAT 
ACCGACAGTA GCGAATCTCC AGGCAAAAAC AGGAGTCGTC ACGTACCAGC AACCGCAAAG 
AGAGCCAAGA GAGTCGAAGG CTTGAAAAGC ATGACAACGG TGAAGATCTG CAAAAGTCAA 
ATGTATCCG 

 

Protein sequence

MTRWDSNRRQ VSSTLLLYCA VSCEAFSGSF YTHTQPSAPT RPSFVGTRSA GTRLFAKKKK 
SPAAMALEKL DNLSFLDEEV PLSKKEQLQL EKKQQKLVKQ QQELQAIDAV EDESSAKIKT 
PVEKHAAQGD SVEFQPSQPK KLSKKEEMLQ KALELEAADE ASANAISSDF DEPQLSKKEL 
KALLKKEEKM AAKLEKKMAK KQQVVDNDER DESLTATDAT VDDEISVNMD VNEVFNGEET 
DEEAPKIRLS LEDKIRKERP PPRIRVMESS QPGYQSLRLE DIGITFRNQE VLKDVTWGVQ 
TGDRIGLVGA NGAGKTTQLR ILAGELEPTT GDVVKSSKDL RVAMLRQEFI DELVPERTLR 
EEFLSIFGVE NQILEDLKSS EQELESTPPE NSEKMQEILD RMQELQNKAE NKAVYALESR 
VQKVMDLMGF TDDETEDLVA SFSGGWKMRI GLGKVLLKDP NILLLDEPTN HLDLDSVEWL 
ESFLRQQNIP MVIVSHDREF LDQVCTKIVD AEGGICTEYE GNYSRFLQLK KARMDAWQAA 
YDAQEKKIKE ERKWIQKFKV KQPQAVKQRQ AKLEKQIKSD DYVKKPPFVG KPFRFRFPDA 
PRLSPEVANV KHLSHAYRNE QAQNRLFEDC ELFIEKGDRI AVLGPNGSGK STLLRLLVGR 
EKPDDGSAEI IGQNVIMNYF EQNQADALDL DKTVLETIQG NSSGQSYNEL RALLGQFLFK 
GDAVDKKIEF LSGGEKARLS LCCMMLRPAN LLILDEPTNH LDIPAKEMLE EALQHFMGSI 
MVVSHDRYFI SKVATSIVAI EDRKLAKYQG DYKFYMEKST HIKEKVEARY VSGVDRIESA 
PIIDLEEIVK PKKNFGGAKT AGLVTRKDKG IKNAKRMKT