Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41582 |
Symbol | |
ID | 7199369 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | + |
Start bp | 253148 |
End bp | 256719 |
Gene Length | 3572 bp |
Protein Length | 874 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185504 |
Protein GI | 219130715 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATG CTGATGCTCC CAATGCTCCC GAAGCTGGTC TCGCTCCGGC TGTTGCTGCC AATGCCCCTG GTATTGTTGG TGACGCCCAA GCTGCCGCTT ACGCTGCGTT TGCTGCTGCT GAAGCTCAAA TGGCGAACGC TCTCGCTGTT CTTGCGGGGG AAGCACCCCC TGATGCTCAA CCCTTTCCTC CACCTCCGGG AGTGGCCGAC ATTCCAGTTG GCCTCCCTCC GGTTGTGGTG GATGCTCCTC TCATTGATCC GTACGACAGT CTTCTCATGA GGGCTGGCAT GAACTACGGA ACTCGCAAGG CTTTTTCTAA GGAGGGCTAT GGTTTGATGT CTGACTTGGT TACTCTTAAC CAGAAGCGAC TTGAATCCCT CATTGATATG ATGAACAAGA AGCATCGCGG TAAATCCTTT CAAGGCGCAA TTCCGTTGGG CCTGAACCTT GTGGCTGAAG ACCTTGAAAT TGATATTGGC CACAAAACCA AGACCACTCT CAAAGTTATT CTCCATTGGG CGGACCTCCA GAAAAGTCTT GGATTAGACG TGAATGCCGA GGATTATACC AATGTTGTTG GTCAGCTTGC CCGCGAACGT ATGGATGAAG AGGAGAAGAT TCTTGAGGCG GCCAAGAAGC TTACGCCTTC TAAGCCAACA ACCCTCAAGG ATATGACCAA GTGGCGTTCC TTCTTTGAAA ACTGGAACTC GTACATGAGT CAGTGTCGCA GTGCTGCGGC TATCCCTCTT TTGTACGTTT ACCGTACCAA CGAGCAGCCC GAGACCGCTT TGGTCGGAAC CTATGTGAAT ATGGATGCCT ATTTGGTTGC CCAGACAGTA CTGTCTGGTT CCAACTTTGA GATTGATAAT CAACGGGTTT TTGACGAATT CAAGGAAGCA ATCACTACAA CCGGACCTGG TTGGTCTTTC ATCAAGACGT ACAACCGAAG CAAGGACGGT CGTGCTGCCA TTTTGAAATT AAAGGAACAG GCAGAAGGAA CATTAAACGA GTCCGTTTGC CGTGATGATG CCATCAAGAT CCTGTCAACT ACGACATACA ATGGTCCGAG TCGTAACTGG AATATTGATA TGCTGTTGCA GAAATTTCAG TATGTTATCT CGGAATTGGT CGAAATTGAC GGAGTCGCGT TGCCGGATGG GCAGCTTGTG ACTTATTTGG TCCAGGCATT GAAGGACCCA AGTCTGAGTT ATGTTCGTGA CACAATTCGC ACCAATGCAA CTTATCGGAA CAGTTTTCCG GAAGCGCAGC TTTTTGTGAA GACTTTTGTG TCTTCGTCCA CGAGCAAATC CGAAAACACG CCTTGACAGG TCAATGATGT GCAAACATCA GGTAGTGGGG CCTCCGGTGG GAGTATGAAA GGAGGTACCG GGAAAGGAGC CAGCAAGCCG ACTCCCTTCA AGGGTGCAGT CACGGCTCGC AGTTATACTC CGGGAGAATG GAAAAGTTTG TCCAAGGACC AACAGGAAAA AGTGCGATCG CTGCGTAATA AAAAGAAGCA AGGAGGGAAA CCCGAGGAAT CAGAGAGGAA TGTTGACAGT GTAGCACGGG ATGAGCCTGT GGACACTAAG GAAGTCCATA CCAGCCGTGA AATGGAACCA ACTTCAGATG CGGCTGGCCT GCAATTTGGC CGTGGTGCGT ATAAGAAATC GGTCGGATTC ACTGCAGACA CCGCTTCTCC TTCCGAAAAC GGAACGAAGA AGCAGAAAAC GCATCACAAT GCGTGAAACG CGGCACCCAA TGCCAGTGTT TCGGGGACTA AGCAATGCAT TTTACCAGAT TGAGTGATAT TGAGCCTCAC CTCTACACGC AGCATTTGTG ATCTCAACGC ATGCACTCAT CTTGGTGAGG GCCGCTGTGA GTTGGATTCA CATGCAGACA CATGCGTGGC TGGGGCAAAC ACTGTCTTGA TTGGTGAATC GCAGAAGTCC GTAACTGTGC GACCTTTCTC CAGTGAATAT TCTGCACTGA AGAATATCCC CATTGGAACG GTTGCCACAG CTTACACAGT ACCAGAAGAC GGGAGAGTGG TGCTTCTTAT TATTAATCAG GCCCTATTCT TTGGGGACAG ATTGAAAAAC ACCCTATTGA CCCCCAACCA GATGCGAGAC TTTGGCATTG AAGTTGACAA TGCCCCTCGG CAGTACGTCG CCAACTCCAA GCACTCTTTG TATGTTCCTG ACTCCCAACT TCGGATTCCG CTGCAGCTGC GCGGTATATT CTCGTTTTTG GAGTCGCGGA AGCCCACGCA ACAGGAACTT GACGAGTGTG AGCACATCAT ACTCACCTCT GATGTGCCGT GGGAGCCTTG CTCAGCGGAC TTTGCCCGTC GAGAAGAAGA GGCCGCTAAG AGAGACCGGA GCGTATCATT GGTAGACACA ACGGGACTTT CCACTGGCCA CGCAATCCTA TCAGCACACC CATATGGTAT ACGAACTGTT GCGGCTTCGC AGCGAATACT TGAGACTTTT TGTTCCTTGA CAGAGGTTGA ATTGTGCGAG ACAAATCTGG CGGACCGCCT TATTGCCTGT GTTAATGTTG CGTCGGATGA TTACTGTGGA GACGGGTTGG ACGGTAGAGC TGACTTGGAT GTGTACCCGG ACTCAGAAGA CTTCACTCGT GTCGTCTCAG GTATGACATC AAGCGAAAGA CGGTCAGCGT TGACAGCTGA GGTTTTGTCG AAGCCTTGGA ATATTGGCCT GGATTCGGCC AAGCGGACTC TGCAAGTAAC AACGCAGAAG GGTGTGAAAA CGGTGATGCA TCCCTTGACC CGACGGTATC GTACTCGCCA ATCGCATTTA CGATTTCCCA CCATTCGGAC CAAGGTTTAC ACCGACACCA TGTTTTCGTC CGTGATTTCC ATCCGCCAGT ACAAGTGTGC CCAGGTTTTC ACAACCAACA TGGCCTATTC GCGTATTTAC CCTCTGCAGA CCAAGCAGCA AGCTCCTGAT GCACTAATGA AGTGGATACA TGATGTTGGG GTAATGAGTG ACCTAGTTTA TGATGGGTCT AAGGAGCAGG GAGGTGGCAA ACATTGGAAA GAGATTGAGC AGCGTCACCA TATCCATCGC CATGTAACGG AGCCACACAG TCAGTGGCAG AATCGAGCTG AAGGAGAAAT TCGTGAAATT AAGAAGGCTG TTCGGCACCA ACTGCAGGTT TCTCGTGCAC CACAGCGACT ATGGTGTTTT TGTTGTGAAT GGGTGTCGGC TATCCGTCGA TTAACTGCTC ACGACATTCC TGCACTAAAC GGTCGAGTTG CCACAGAGCT TTTGGAAGGG GACACCCCCG ATATTTCTGA GTACGCGCAA TTTGACTGGT ATGAGCCTGT CTGGTTCATT GACCCAACTT CTGCTTTCCC TGAAATGAAG AAGAGATTGG GCCAATGGGT CGGAGTTGCA TCAGATGTGG GACAGGCAAT GACTTTTTGG ATTCTTCCAA AATCATGCAT CCCAATTGCA CGTTCCTCTG TTGCTCGCGT CTTTCCAGAC GTAGCCGCTA CCGATGAATT TAAGGCTGAC CTTGCTGAAC TTGATCTAGC CATCGAAAAT AG
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Protein sequence | MADADAPNAP EAGLAPAVAA NAPGIVGDAQ AAAYAAFAAA EAQMANALAV LAGEAPPDAQ PFPPPPGVAD IPVGLPPVVV DAPLIDPYDS LLMRAGMNYG TRKAFSKEGY GLMSDLVTLN QKRLESLIDM MNKKHRGKSF QGAIPLGLNL VAEDLEIDIG HKTKTTLKVI LHWADLQKSL GLDVNAEDYT NVVGQLARER MDEEEKILEA AKKLTPSKPT TLKDMTKWRS FFENWNSYMS QCRSAAAIPL LYVYRTNEQP ETALVGTYVN MDAYLVAQTV LSGSNFEIDN QRVFDEFKEA ITTTGPGWSF IKTYNRSKDG RAAILKLKEQ AEGTLNESVC RDDAIKILST TTYNGPSRNW NIDMLLQKFQ YVISELVEID GVALPDGQLV TYLVQALKDP SLSYVNDVQT SGSGASGGSM KGGTGKGASK PTPFKGAVTA RSYTPGEWKS LSKDQQEKVR SLRNKKKQGG KPEESERNVD SVARDEPVDT KEVHTSREME PTSDAAGLQF GRDTCVAGAN TVLIGESQKS VTVRPFSSEY SALKNIPIGT VATAYTVPED GRVVLLIINQ ALFFGDRLKN TLLTPNQMRD FGIEVDNAPR QYVANSKHSL YVPDSQLRIP LQLRGIFSFL ESRKPTQQEL DECEHIILTS DVPWEPCSAD FARREEEAAK RDRSVSLVDT TGLSTGHAIL SAHPYGIRTV AASQRILETF CSLTEVELCE TNLADRLIAC VNVASDDYCG DGLDGRADLD VYPDSEDFTR VVSVYDGSKE QGGGKHWKEI EQRHHIHRHV TEPHSQWQNR AEGEIREIKK AVRHQLQVSR APQRLWCFCC EWVSAIRRLT AHDIPALNGR VATELLEGDT PDISEYAQFD CHRK
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