Gene PHATRDRAFT_41581 details

Gene Information

• Locus tag: PHATRDRAFT_41581
• ID: 7199410
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011699
• Strand: +
• Start bp: 247658
• End bp: 251176
• Gene Length: 3519 bp
• Protein Length: 1079 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002185503
• Protein GI: 219130713

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCGAG TTTGCAAGGC AACCGGTCCT ACCCGGAAGG GAGCGACCGA AACGGTGCCG 
GAGGAGCGAG TGGAAGAAGA AACGCCCTTT GAGGCCGTTG AGTCGCCGTC CAAGGACAGT 
GACAATGAGA CGCAACCATC GTCCATGGGC GATGACAATG ACTCACAGTC TGAGATCGAG 
TCGTACAAGA TTGATACCGA CATTGATTTC AAGTACAACC CAAACTTTTT TGAGGACAAG 
AAAGCCCTTG AAAGTGTTCT AAGGAATACT ATGGGATTTG GAGATATCCA TGTGAAGTCA 
CTCCAAAACG AAGGTTTGAA GACCGCAAAT GATTTCTTGC TTATTTCTAT GAGTGACATC 
AATGATCTTT GCGACAAGCT TTTGTTTGCA ACAGTTTACA GGGCTCGCCT ACGGGCATCT 
GCTACATGGT TACGTAGTCA ACCCGACAAC GTAAATATTA CCCAAGAATG GACAATTCCA 
GTTATGCAAT TGGAAATGCA GATGAAGGCG CAAGCGTCTC CATTTGGAAT CTCCGAGACC 
AACAAAACAG ACAAGTCAGT CTCCAGTCTG GTGCCTGATC CCTTTGATGG TACACAGAAG 
AAGTGGCTCG CCTTTCAATA CAGTTTTGAG GCATGGGCCG GAGCAAGTGG GCAATCTTTT 
GATGCCTGCA TCTCACATGA CTCGGAGCGA TATTCCCGTT CAGAACCAAC AGCGACCTAC 
AATGACATCA ATGACGAACC TGATTCATTT AAATATGACT GGAACGTTAA GTCAGTTCGC 
AATTCAAACA TCTTTTTTTA TGCTCAAGTC GCTCACAAGC GGCGGAGATG CATGGGGCCT 
TATCGAACCT TACGAGGTTT CAAAAAATGG CCGTCATGCC TGGATCGCCT TGTGTGCATT 
CTATGAAGGG GCCAGTCAGG TGGGCTTAAC CACAGAAGAA GCTCGCACTA CAATTCTGAC 
ATTGAAGTAT ACCGGACAAT CCCGGAACTT CACTTTTACC AAGTATGTTC AAAAGCATCA 
TACTGGTAAC AACATATTGG CTCGCAACAA AGAGGCCTAC ACGGACTCAC AGAAAACAAA 
CTTTTTCCTA CGGGGAATTG TTGATCCTGA ACTTATGGCA TTCAAGGCAG CTGCTGAAGC 
TAACCTAAAT GAATGGAAGT TCGAATGCGT TATCACGTAC ATGCGTACTC AAGCCGCCAA 
GCTCACGAGC AAGGACGGTA AGGATTCCCG AAACATTCGT CAGGCTACAG GCTTGTCGAA 
AAACAGGAAC AACAAAAACA ACCGGCGCAA GCGCTCGGAA TACCAAAGCC AAGGCAAAGG 
TAACAAAGAG TCGGGCAAAG GAAACAATGC TCCTAGTACT CAACTCCGCA AGGACATCTG 
GGATGAATTG TCTCCCGGGA TAAAGGATGC CATCAAAGCG GCAAAGCGTA GAGCGTCTAC 
GGACCCGCGC ACGGCTAAAA GAGCCAAGAC TAGTAGTATG GATAACTCAA ACGCAAGCGT 
TGAGTCCTAC TCGCCTGATT TCAGGTCAAT GTCTACTGAA AACTCATCAA CTTGAATCAG 
ATTCGGCACG CCGGACATCA GACTGATGAC ATTCCGAAGT TTTTATCCCA AGGGAAATCT 
CTTCACGGAA TTGAAACAAT TGATGGCAAC TACATTCTTT TTGAATTGAA GGGACGCACA 
TCATTGTTGT ACTCACGAGT ACCTACTCGC CATGAGCTTG AGAACTGCCT GCACATTGAT 
CTTACATCTG ATCAACCCTG GGATCCAAAC AGCAAAGACT GGGAGGATAA TGAGCAGCGC 
TACACGCGTC ATGACCGACA ACGGAATGCA CGCTATACCG CAACTGATAA TGCGGATGAG 
GAGAACTTTT ACCATGGGTA TTTCTCTCTC CCTGACTCTA AGGAGTTCCC GGTTCTACCG 
GCAAACAATA ATGTTATGAA CCCACATGAT TTCGTACGCG AGATCAAATA TGCTACTGCA 
CGGGTTTCAA AATCTAGCCC ACGGGATCTA GATGTCGATC GAGACAAACT TCGCCGCATC 
CTGGGACATG TTCCTATGGA AGTAGTTGAC CAAACACTGG AAGCTACAAC ACAACTTGCG 
GAACGCTCTG GCAAAATGCC ACTGCATCGA CGTTTTAAAA CGAAGTTTGA ACAATTGCGA 
TACCGCCGGT TGAAGTGTAC GTTATATAGC GACACTTTCA AAACTACTGT TAAATCCTCC 
CGAGGACACA CGCATACCCA AGGGTTTGTA TGTGGTGATT CTTACTTTGT ATACCACTTT 
CTTATGAAAG CGGAATCCGA AGCAGACCAA GGTCTTGCGT CAATTATACA AGATATAGGA 
ATTCCGGCAC AAATTCACAC CGACAACGCA AAAGTGGAAA CCTTAAGCAA ATGGAAGAAA 
ATCACTTCCG GTCACTGGAT AAAAGTCACA GTCACGGAAC CATACTCACC GTGGCAAAAC 
CGTTGCGAAC ACGAATTCGG TGCGGTTCGG ATCCAGACAC GACTTGTTAT GGAAACGACA 
CAATGTCCAG AACAGCTTTG GGACTACGCG ATTACCTACG TGGTAATTGT GCGTAATAAT 
ACCGCTCGCA AAGCCTTAAA TTGGCAAACG CCCTTAACGG TTATGACAGG TGACACGAGC 
GATATTTCAG AATTGTTGGA TTTCGAGTTC TACGAACCGG TACAATATTT TGACAATCCT 
GAAATTAAAT ACCAACAAGC TAAGGCTAAA GTTGGTCGGT GGCTTGGTAT TGCAACAAAT 
GTTGGACAAG CTATGTGCTA CTATGTCCTA ACAGACAAAG GAACCGTGAT AACGCGTTCC 
ACAGTCACAC CACTTCACAA AGTTGATTTG ACTGCTTTGC AAACCTCTCT TACAGCTTTT 
GATGCTATGA TAAGGGAGAT TTATCAGCCT ACTGATTTTG CTCACAGCAC TAAAAAGCAA 
GCTGCCTCGT TACGACGAGA TGAAGCAATG AAGGTTGCCA GAAAAACTGG TGAACCTGAA 
GATCCAGGAG TCCGTAACAG ACATGTTCTG TATGACTTAA ATGAGGGAGC CGACCATGAC 
CAAGTGGAAC CAGGACTATC AGTTGATGAT TACTACGGTA ACGACGACGA AAAAGAGTCT 
GGTTCGTCGG ATCTCCTTGT CGGCAGCGAA GTACTCCTTA CTAAGGGAGG TATACAACAT 
CTAGGCAAAG TCACCAAGCG TGATAAAAAT GGCCAGCCCA AGGGCTCAAA CGAAACAACC 
AATTATGTTG TCGAGTTCAA TGATGGTACT GAAGAGATTC ATGGATACAA TGCTCTGCTT 
GACGCTGTGT ATAAGCAAGT TGATGATGAT GGTAATGAAT GGTATACTTT TGAAGATATT 
GTTGACCATC AAAGGCGCCC ACGTGGCGGC CGAGGACGAA CGAAAGGTTG GTTCCTCCGT 
GTTAAATGGG CCAATGGTGA ATACACCTGG GAGCCTCTTA CCTCTTTAAA GGAAAGCAAT 
CCTTACCCAG TTGCAAAATA TGCAGCGTCA ATGAATTAA 

 

Protein sequence

MARVCKATGP TRKGATETVP EERVEEETPF EAVESPSKDS DNETQPSSMG DDNDSQSEIE 
SYKIDTDIDF KYNPNFFEDK KALESVLRNT MGFGDIHVKS LQNEGLKTAN DFLLISMSDI 
NDLCDKLLFA TVYRARLRAS ATWLRSQPDN VNITQEWTIP VMQLEMQMKA QASPFGISET 
NKTDNQFAIQ TSFFMLKSLT SGGDAWGLIE PYEVSKNGRH AWIALCAFYE GASQVGLTTE 
EARTTILTLK YTGQSRNFTF TKYVQKHHTG NNILARNKEA YTDSQKTNFF LRGIVDPELM 
AFKAAAEANL NEWKFECVIT YMRTQAAKLT SKDGKDSRNI RQATGLSKNR NNKNNRRKRS 
EYQSQGKGNK ESGKGNNAPS TQLRKDIWDE LSPGIKDAIK AAKRRASTDP RTAKRAKTSS 
MDNSNASIRH AGHQTDDIPK FLSQGKSLHG IETIDGNYIL FELKGRTSLL YSRVPTRHEL 
ENCLHIDLTS DQPWDPNSKD WEDNEQRYTR HDRQRNARYT ATDNADEENF YHGYFSLPDS 
KEFPVLPANN NVMNPHDFVR EIKYATARVS KSSPRDLDVD RDKLRRILGH VPMEVVDQTL 
EATTQLAERS GKMPLHRRFK TKFEQLRYRR LKCTLYSDTF KTTVKSSRGH THTQGFVCGD 
SYFVYHFLMK AESEADQGLA SIIQDIGIPA QIHTDNAKVE TLSKWKKITS GHWIKVTVTE 
PYSPWQNRCE HEFGAVRIQT RLVMETTQCP EQLWDYAITY VVIVRNNTAR KALNWQTPLT 
VMTGDTSDIS ELLDFEFYEP VQYFDNPEIK YQQAKAKVGR WLGIATNVGQ AMCYYVLTDK 
GTVITRSTVT PLHKVDLTAL QTSLTAFDAM IREIYQPTDF AHSTKKQAAS LRRDEAMKVA 
RKTGEPEDPG VRNRHVLYDL NEGADHDQVE PGLSVDDYYG NDDEKESGSS DLLVGSEVLL 
TKGGIQHLGK VTKRDKNGQP KGSNETTNYV VEFNDGTEEI HGYNALLDAV YKQVDDDGNE 
WYTFEDIVDH QRRPRGGRGR TKGWFLRVKW ANGEYTWEPL TSLKESNPYP VAKYAASMN