Gene PHATRDRAFT_41507 details

Gene Information

• Locus tag: PHATRDRAFT_41507
• ID: 7199339
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011699
• Strand: +
• Start bp: 35120
• End bp: 38487
• Gene Length: 3368 bp
• Protein Length: 1107 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002185474
• Protein GI: 219130653

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCCCG CCACCCGGCA AATGACGAGT GCAGCCGTCT ATGCCCACCT TTTGGACAAC 
GTACTTCTTC TTCCCCAAGG GCATCCTATC CGCCTCAGTT TTGAGCAACA AGGATATGAA 
TCGGCTGATG ATCTTCTGTG TATTTTTGAG AATGAACTTG AGTCTCTTGG ATACACTCCT 
TCTGTCCTTC CCGACGGCCT GGAAAACCCG CCAACTATAC CCCTTCTCAT GGCGCACCGA 
CAGATCATAC GTCATTTCTT GCGCTGGCAG GCATCTTTGG AACGACAAAA GGGGACACCC 
TTGAAGAACT CCGAGCTTGT TGCACTTAAC AATGAAGATT TTGTCCTTTA CCGTCGCTCA 
GCCCTTGGTC AAGTCTCGAC AGCAACTGCA CCGGTTAATG CTCCCCCAAC TGTCCAGAGC 
CCCATAGGAA AGACACGTTC GGCTGTCGAG GACTTCAAGC GTGGGATCAA ACGTGACAAA 
ACTCACTATC CCGTGCTTAA AGATGATCGG TACTGGGACA ACTTTTATCG GTCGTTTGTT 
GTTACTGCCG TAACACATAA CGTTGACAAA GTTCTAGATC CGACGTACAT CCCTACCGAT 
CCCTTGGAGA AATCCCTTTT TGAAGAGCAG AACAAGTTCG TATATTCTGC TCTAGAGCAT 
ACTCTCCAGA CGGACATGGG CAAGAACATT GTACGCGAGC ATAGTTTCGA CTTCAATGCC 
CAGGAAGTTT TCCGTAAGGT TGTGAAACAC TACACAGAGT CCGCTAGCGC GAAGATTAGT 
TCGTCTACTA CCCTGGGATA CCTTACAACT GCAAAGTACG GATCGTCATG GACTGGCACA 
GCAGAAGGTT TTATTCTTCA CTGGAAAAAT CACTTGCGCA TCTACAATGA CACTGTTCCT 
GCTGGTGAAC AGCTTCCTCA GCAACTATGC CTTAGTCTTT TGGAGAATGC TGTTCATGAT 
GTACCTGAGC TTCGACAGGT AAAAATCACT GCAACTCTTG ACTTAGCAAA GGGAGGTAAT 
CCTATTAGCT ATGGTGGTTA TCTCAGTCTA CTACTCGCAT CGGCATCGCT CTACGACAAC 
GGCAATAATC TATCTAATTC TCGTAGTGGC AAGAACAAGC GCAACATCTA TGCTAATGAA 
CTAGAGTACA ATCCGATGGA TTTTGAGAGT AAACCGGATG TAGACTATGA TATAGATGTG 
TCGCCTACCG CAATCTACGA AGCCAATGCT CATGCCCGTA AGAGCAGTTC CCGGAATCGT 
AGTCCGGCAA CTAATCGCGA GCGACCTTAC ATCCCTCGTG AAATGTGGAA CCTGCTCTCC 
GACGATGCCA AAGCCATCCT CCAAGGCTTA ATAGCCCCCG GGAAGCAGGC CCCGTTGAAT 
AATAGTTCGC CACACCAATC GTTGCAGGCC AATACGCACG ATACCATTGG CGCGGAACAA 
ATCACAACGG ACACCTTCCA TGATTGCGCA CCCGAAACTG AATTGCTTGC CCACCTGACT 
GAGCGTGTTA GTCACATGAG CGACGGCGAC ATACGTAAGG TACTTGCCGC ATCTCGTAAT 
GGTCCCGCCT ATGATGAGCC CACACCACTG CAATCTAACG TACTTCAATA TCAAGTGTCT 
CGTCACAACG TCATTGAAAC TACGGCAGCC CTCGTCGACC GTGGAGCCAA TGGAGGTCTT 
GCCGGCAGTG ATGTCATGGT CTTGCATAAA ACAGGTCGTT CTGCAACCAT CACAGGTATC 
AATGATCATA CCTTGTCCGA TTTGGACATT GTCACCGCTG CTGGCTACAC TGAATCCCAA 
AATGGCCCCA TCATTCTCAT TATGAACCAA TACGCCCATT TGGGACAGGG TAAAACTATC 
CACTCCAGTG CACAGCTTGA ACACTATCGC AACCATGTCG AAGACCGTTC CCGTACTGTA 
GGAGGTAACC AGCGAATTGT AACATTGGAT GACTACATCA TCCCATTGCA CATTCGACAA 
GGACTCGCGT ACATGGATAT GCGGCGTCCT ACCGACAAGG AACTTGCGAC CCTTCCACAC 
GTTGTCCTAA CCTCCGACGT CGACTGGGAT CCCTCCGTAC TTGACCACGA AATTGATCTC 
GCAACCTCTT GGTATGATGA CATATATGAT TTGCCTCAAT CACCTTACGT TGAACCACGT 
TTTGACCATA CAGGCAAATA CCTCCATCGT CACATTTCCC TTTGCAACCA TCGCGATGAC 
GTTGTTGACC GTGTATTATA TTGCCAACAG CACCTCGTCA CGAAAAATGT GCAAGATTAT 
GAGGCCCTTC GTCCGTGTTT TGGATGGGTC TCTGCTGAAA CCGTTCGCAA GACCATCATG 
GCGACCACGC AGCATGCACG CGAAGTATAT AACGCTCCGT TACGCAAACA TTTTAAGTCT 
CGCTTTCCCG CTCTAAATGT ACACCGTCGT AATGAACCAG TTGCTACCGA TACCATTTGG 
TCCGACACCC CTGCTGTCGA TAATGGTGCT AAATTTGCAC AACTTTTCGT TGGTCGACGC 
TCCCTTGTCA CCGACGCTTA CCCCATGAAA ACTGACAAAG AATTCGTCAA TACCCTTGAG 
GACCATATCC GTTACCGGGG TGCCATGGAC AAATTGATTA GCGATCGTGC CCAGGTTGAA 
ATCAGCAAAA AGGTCACCGA TATTACACGC GCATATAATA TCGACCAGTG GCAAAGTGAA 
CCAAACCATC AACACCAAAA CTTTGCCGAA CGTCGTATTG CCACTATCGA GGCTAATACC 
AACAACATTC TCAATCTTTC CGGTGCCCCT GATTCCGCCT GGTTACTTTG CGTGACATAT 
GTTTGTTATG TTTTCAACCA TTTGGCACAT GAATCCCTAG ATAACCGCAC TCCCCTTGAA 
GTCCTCACCG GCTCCACGCC TGATATCAGT GTTCTCCTTC AGTTTCATTT TTGGGAACCG 
GTCTATTATA AGCTCGAAAA TGCGACATTT CCTTCTGGTG GTACCGAACA ACAAGGACGT 
TTTGTTGGCA TCGCCGACTC CGTCGGCGAC GCTCTCACTT ATAAGATCCT TACCCACACC 
ACCAACCGCA TTCTTCATCG CTCTAGTGTC CGTTCTGCGA CCATTCCCGG ACAAACCAAC 
CTACGCCTTA CGCCACAGGA TGGGGAGAGT GGTCCTAAAC CCATCAACTT TATCAAGTCG 
CGTAGAACCG AAAACAAAAA TTCCTATGCC ATTAAGGAGT TGCCTGGTTT CACACCTGAT 
GACCTTATAG GTCGTACGTT CCTCACCGAC ACTCGGGATG ATGGGGAGCG TTTGAAGGCA 
CGAATCACGC GGAAAATATT GGACCCAGAC AAGCCCTCGG ATGTAAAGTT CCTTGTCGAA 
ATCAATGA 

 

Protein sequence

MVPATRQMTS AAVYAHLLDN VLLLPQGHPI RLSFEQQGYE SADDLLCIFE NELESLGYTP 
SVLPDGLENP PTIPLLMAHR QIIRHFLRWQ ASLERQKGTP LKNSELVALN NEDFVLYRRS 
ALGQVSTATA PVNAPPTVQS PIGKTRSAVE DFKRGIKRDK THYPVLKDDR YWDNFYRSFV 
VTAVTHNVDK VLDPTYIPTD PLEKSLFEEQ NKFVYSALEH TLQTDMGKNI VREHSFDFNA 
QEVFRKVVKH YTESASAKIS SSTTLGYLTT AKYGSSWTGT AEGFILHWKN HLRIYNDTVP 
AGEQLPQQLC LSLLENAVHD VPELRQVKIT ATLDLAKGGN PISYGGYLSL LLASASLYDN 
GNNLSNSRSG KNKRNIYANE LEYNPMDFES KPDVDYDIDV SPTAIYEANA HARKSSSRNR 
SPATNRERPY IPREMWNLLS DDAKAILQGL IAPGKQAPLN NSSPHQSLQA NTHDTIGAEQ 
ITTDTFHDCA PETELLAHLT ERVSHMSDGD IRKVLAASRN GPAYDEPTPL QSNVLQYQVS 
RHNVIETTAA LVDRGANGGL AGSDVMVLHK TGRSATITGI NDHTLSDLDI VTAAGYTESQ 
NGPIILIMNQ YAHLGQGKTI HSSAQLEHYR NHVEDRSRTV GGNQRIVTLD DYIIPLHIRQ 
GLAYMDMRRP TDKELATLPH VVLTSDVDWD PSVLDHEIDL ATSWYDDIYD LPQSPYVEPR 
FDHTGKYLHR HISLCNHRDD VVDRVLYCQQ HLVTKNVQDY EALRPCFGWV SAETVRKTIM 
ATTQHAREVY NAPLRKHFKS RFPALNVHRR NEPVATDTIW SDTPAVDNGA KFAQLFVGRR 
SLVTDAYPMK TDKEFVNTLE DHIRYRGAMD KLISDRAQVE ISKKVTDITR AYNIDQWQSE 
PNHQHQNFAE RRIATIEANT NNILNLSGAP DSAWLLCVTY VCYVFNHLAH ESLDNRTPLE 
VLTGSTPDIS VLLQFHFWEP VYYKLENATF PSGGTEQQGR FVGIADSVGD ALTYKILTHT 
TNRILHRSSV RSATIPGQTN LRLTPQDGES GPKPINFIKS RRTENKNSYA IKELPGFTPD 
DLIGRTNHAE NIGPRQALGC KVPCRNQ