Gene PHATRDRAFT_31322 details

Gene Information

• Locus tag: PHATRDRAFT_31322
• ID: 7199351
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011699
• Strand: -
• Start bp: 106216
• End bp: 108388
• Gene Length: 2173 bp
• Protein Length: 557 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002185522
• Protein GI: 219130753

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCCGGATCC CAATCCAACC CATCTTGCAC ACCGGGACCC TCGTTCCAAG GGCCAAGCTT 
GATTCACTAC TTCCACCACC AACACAACCA CCACCGTATC ATCGTCCATC CATTCTTTGA 
TGCGTAACAA TACCCAAGAT CTAGATCACA GAAACTAACG AACGAACGAA CGAACTAACG 
AATTCCTAGC GAGCGATAAA CGGATCGATA CCAGTGGTGA CATGATTGGA CCCGCCATTG 
TAAGTACAAC CCGTCCTGTC GCACCTTGCT GTACGAACGA ACGAAGGTTT ACTGTACTTG 
GATTCTCACC CATTGCCTCA ATTGTGTGTC ATCGATCGGT TCCGCACTTT GTTAGGATCC 
AGCGGATGTC GGCTTGACGG GCCTCTTCTG GCTTTTTTTG AGCTACGGCT ACGTCTTGTA 
CTCGAGCAGT AATCTCATTT CGGAAGGATC CGAGCTGCTC CTTCTCATCC CCAGCATGGC 
GGGGTTGGTC GGCGGAGTGG TCCTCCCCTT GTTAGGAGCC GTCCCCGACG GCGCCATCAT 
TCTCTTTAGC GGACTCGGAA GTCTTGAAGA CGCCCAAGAA ACATTGTCTG TCGGAGTCGG 
GGCCCTAGCC GGCTCCACCA TCATGCTACT GACCGTTCCC TTTGCTCTTT CCGTCTACGG 
AGGTCGCGTA GATCTCGACG CCAACGGCGT ACCCGACTAC CTTGTCAAAC CCAAACTTTC 
CACCAAAACG TCCTGGAAGG CCGAATTCAC AAAGACGGGC GTTACCTTGT CCGATGCCGT 
GCATCACGGT GGTGTCTTGA TGGCCCTCAC TACCGTTCCC TACTTCCTCA TACAGGTGCC 
CGCATCGATC TACGCCACGC CCGAGAATTC GGAAGACGTC GTTGCGGCAC AGGAGCACTG 
GTGGGCGGCG GCTGGATTCA TTCTCTGCTT GCTGGGCCTG ACGGTTTACA TGAGACTGCA 
GTTGCATATT TCCCAACAGG GACAGGACAA GGGCAAGCGC ATGGCCGTCA TGAAGAAACT 
GCTCAAACAG GGACAGGTTT CACTCAGTGG AGCCATTGCC GCACAAGTCA ACGCCAAAGA 
GTCCGCGCTG CAGGCGCAGG CTGCGTCCGA ATACCAGTCC ATCCACGATG TCAAAGATGG 
TTACCCCAGT CCGGCCATTG CGGCCTTTCT GAAAGAAATT CTGGCCGACG CCTTTTATTC 
CTACGATTCC GACACCAATG GACAACTCGA CAAAACCGAA GTCTTTGTCT TTTTCCGAGA 
CTTTCACGAA AGCATATCCG AAGAAGAAAT GGATAAGCTC TTTGCCAAGT TCGATACGGA 
CGGCTCCGGT ACCATTTCTT TGGACGAATT TATCGGCCTC GCCTACACGC TCATCAAGGC 
GCAGGACCAG CAAACGGCGC CGCGTCACCT GGACGCGTCC AGTCGCGGTA CCCGTGCCGC 
CCTGGTACAG GCTGCCTTTG GCGAAGACGA AGACGAGGAG GAAGAAACCG TACCGGAAGA 
ATTCACCTCG CTCACGCCCG ATCAACAACA ACGCGCCATC AAATGGAAGG CCTTTCGGAT 
GTTGGCGTTA GGAACCGGCC TGGTCGTGCT CTTTTCAGAT CCCATGGTGG ATGTCATGCA 
AGAGATTGCG GTGCGGTCGG GCATATCGCC CTTTTACGTT TCCTTCGTGC TGGCACCATT 
GGCGTCCAAC GCCAGCGAAG TGATCGCCTC GCAATACTAC GCCAGCAAGA AGACGCGCAA 
AACGATTACC GTGAGTTTGA CGGCGTTGGA GGGTGCCGCT TGCATGAACA ATACGTTCTG 
CTTGTGTATT TTTATGGGGC TGGTCTTTGT GCGCGGCTTG GCTTGGCACT ACACGGCCGA 
GACGGTAGCC ATTGTGATTG TGGAATTCAT AATTGCATTT ATCGTGATTC GAGAAACTAC 
CATGACGACG GGAATGGCCA TGTTCATCTT GGCGTTGTTT CCGCTGAGCA TTGTGCTCGT 
CGCCGCTCTA GAAGCGTTTG GTTTGGATTG ATGGATCGGT TCACTATTTG AGTGGGTCGG 
TGAGTCACAC GCGTGTTGAA AGTATTTGTT ACGTGTCGGC GCCGGGACCA CAACCTTGGC 
TCCGTGCCGA ATGCACTTTT TGGAATGCAA TGTTCCGTTA ATGAAAACGC TAGTAGAGAG 
AACAAATGTA TGG 

 

Protein sequence

MIGPAIDPAD VGLTGLFWLF LSYGYVLYSS SNLISEGSEL LLLIPSMAGL VGGVVLPLLG 
AVPDGAIILF SGLGSLEDAQ ETLSVGVGAL AGSTIMLLTV PFALSVYGGR VDLDANGVPD 
YLVKPKLSTK TSWKAEFTKT GVTLSDAVHH GGVLMALTTV PYFLIQVPAS IYATPENSED 
VVAAQEHWWA AAGFILCLLG LTVYMRLQLH ISQQGQDKGK RMAVMKKLLK QGQVSLSGAI 
AAQVNAKESA LQAQAASEYQ SIHDVKDGYP SPAIAAFLKE ILADAFYSYD SDTNGQLDKT 
EVFVFFRDFH ESISEEEMDK LFAKFDTDGS GTISLDEFIG LAYTLIKAQD QQTAPRHLDA 
SSRGTRAALV QAAFGEDEDE EEETVPEEFT SLTPDQQQRA IKWKAFRMLA LGTGLVVLFS 
DPMVDVMQEI AVRSGISPFY VSFVLAPLAS NASEVIASQY YASKKTRKTI TVSLTALEGA 
ACMNNTFCLC IFMGLVFVRG LAWHYTAETV AIVIVEFIIA FIVIRETTMT TGMAMFILAL 
FPLSIVLVAA LEAFGLD