Gene PHATRDRAFT_50498 details

Gene Information

• Locus tag: PHATRDRAFT_50498
• ID: 7199283
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: +
• Start bp: 223964
• End bp: 226154
• Gene Length: 2191 bp
• Protein Length: 682 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002185402
• Protein GI: 219130500

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAAATCTTT TTCCTCGGAA ACAAGTCTAG TCTTTTTGTC GTGTCACGTG CTTGCTGTTG 
TCATGCCGCA GTTCCTTGCG GTTGTGAGTG GATTCTTACT AGGCTCTGCT TTAACGTACG 
CATGGTTGAG CCGACAGGAT CGTTCCTCAT CGAAGACACT ACCAGAGGAT GAGCCATCGT 
CCACGTCAAG GTCAATCGCG ACACCATCGC GTCAAGCTGG GCCGACGGCG CATCTCCGCA 
CGGACGGCCT CTTGACAGAT TTGGTACGCG AATTGTGGAG TTACATTAAC GTGGCAGGTT 
GCGACACTAT CCGTTCCACA GTGGAACCCA TGTTCGTTAC GTTGCCGGGT CCGTTGAAGA 
CTCTGCGTTT CACCAAAATC GATCTGGGAT CGGTACCGAT TCGGATGGAC AATTTGGTCG 
TTCACGAAGT CCACAACGAT TCCGTCACTG TGGCAATGGA CGTGGCCTGG GATGGGAATT 
GTGATATGCA GCTCAAGGCG GATTACATTG GTTCATTTGG TGTTAAGGCA ATCAAGCTCA 
AAGGACGCCT GTCGTTACTT CTCAAGCCTT GTGTAAACGC TTTGCCACCG TTCTCAGCCA 
TTCAGTACGC CTTCGTTACA CCACCACAAG TTGAGATTGA CTTTACCGGT CTCGCGCAAG 
TCGCGGATTT TGCGGTCCTC GACAAGAGAA TTCGAGCCAT TATTCAAGAT TCGTTCGCCT 
GTGTCACATT ACCGTCCCGC ATGATGTACA AAACGGATCC GGCCTGTGAT TACTTACGTA 
CGTACCAACC TCCCTTGGGG GTGGCGCGAA TTACCGTCGT CCGCGGTCGC GGCTTTCATG 
TCGAAAAGAG ATCCTTGCGA GCGCACGACG TGCCCGACGT CTTTTGCCAG GTTTCAATCA 
ACGCCTCCCA ACCTTTCACA ACCCGTACCG TCAAGGATAG CCTGGAGCCG GTATGGGAGG 
AGAGCTGTGA TTTCATCGTC ATGGATTTGG ATCAGCATGT GATACTGAAC GCCTGGGATG 
AAGACAACGG GGCACTCGAC GCCAATGACG ACCTCGGAAC AGCGAAAGTG TCCGTTGGGG 
ACCTTTTACT GGCCGGCAAG ACGAAGGAGG TGGAACTCTT GGAGGGTAAT CTAAAGCGTA 
CGGGCGCTTT TGTCACACTG CACTGCGAAC TATTACCGTG GACATCAGGG GAGTCGTTTG 
AGGGCCTCCC TAAGGCCCCG ACCGAATCGA CAAACACTGC CAATTCGTTG GCAGGCTTGA 
TGACCGTAGT CGTGGTCAAG GCGAGCAATT TACCATTGGC GAAAAAAGAA GATGCGGCAT 
CGTTCGTCAA GGTCAAGTAT GGGGCAGCCT TTGAGTTTTT GACCAGCGTG GTTTTGCCTT 
GTCCAGGGCT GGACGCATTG AATCCAGTTT TTGACGAGGT CACCTTCATT CCGCTCCCCC 
AGGCTTTAGT GGATGATAAG AACGACGTAG TTCTTGAACT CTGGAATGGG CAAGCTATCC 
TGGGCAGTGT CAATATCACG CATCAGTCTT TATTGAACAT GGATGACCAT GTACGGACAG 
AAAACCTTCT CGTCGGTGAC AAGGGTGCAA AACTTTTCTT TCGGGTCTCC TTACAGGGAG 
TTGCGGAAGC TCCCATTGGA ATACCGACGG TGTCTGCTAT TGAACCGATG GGAAAAGACG 
ATTCTGAGGA CCCCGGCACG GCAGCTGCAC TTGTTGGCGG TACTTTGGGC AAAGTAAGTG 
TGACGGCAGT CCGAGGATGG GGCTTTGTGG TGGAAAAGCG TCGGTTTAAA AAGAACGACG 
TTCCCGACGT ATACTGCAAT ATACAGTTTG GCTCGAGTCC TACAGTGTGG CGGACGAAAA 
CGGTGCGCAA TTCTACGACA CCCACTTGGA ACGAATCCTC CACGTATCCG CTGTCCGATC 
ACAGCCAAAT TTTGCATTTG AACGTGTTCG ACGAAGACGG CGGTGCCCGG GATACGGACG 
ATGCGTTGGG ATCGGCCCGG GTAGCTGTCG GTAAGATTTT ACTGGCGGGC GGTAGTATGG 
ATGTGGAGCT GCTCCGTACA GGCAAGCCTA CCGGATGTTA CATCCAAGTC CGTTGTGCTC 
TATTGGACTG AAAACAACAT TCACCATCCA TAAGTGAACA GTAGTGACTA CATCACGTAT 
GCTATCAAGT ATCTTATATT TTGCATGCTT T 

 

Protein sequence

MPQFLAVVSG FLLGSALTYA WLSRQDRSSS KTLPEDEPSS TSRSIATPSR QAGPTAHLRT 
DGLLTDLVRE LWSYINVAGC DTIRSTVEPM FVTLPGPLKT LRFTKIDLGS VPIRMDNLVV 
HEVHNDSVTV AMDVAWDGNC DMQLKADYIG SFGVKAIKLK GRLSLLLKPC VNALPPFSAI 
QYAFVTPPQV EIDFTGLAQV ADFAVLDKRI RAIIQDSFAC VTLPSRMMYK TDPACDYLRT 
YQPPLGVARI TVVRGRGFHV EKRSLRAHDV PDVFCQVSIN ASQPFTTRTV KDSLEPVWEE 
SCDFIVMDLD QHVILNAWDE DNGALDANDD LGTAKVSVGD LLLAGKTKEV ELLEGNLKRT 
GAFVTLHCEL LPWTSGESFE GLPKAPTEST NTANSLAGLM TVVVVKASNL PLAKKEDAAS 
FVKVKYGAAF EFLTSVVLPC PGLDALNPVF DEVTFIPLPQ ALVDDKNDVV LELWNGQAIL 
GSVNITHQSL LNMDDHVRTE NLLVGDKGAK LFFRVSLQGV AEAPIGIPTV SAIEPMGKDD 
SEDPGTAAAL VGGTLGKVSV TAVRGWGFVV EKRRFKKNDV PDVYCNIQFG SSPTVWRTKT 
VRNSTTPTWN ESSTYPLSDH SQILHLNVFD EDGGARDTDD ALGSARVAVG KILLAGGSMD 
VELLRTGKPT GCYIQVRCAL LD