| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50496 |
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| Symbol | |
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| ID | 7199282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011698 |
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| Strand | - |
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| Start bp | 215603 |
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| End bp | 217216 |
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| Gene Length | 1614 bp |
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| Protein Length | 504 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185450 |
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| Protein GI | 219130601 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.661697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAGTTTATCT GTGAATGATA CTTCCCTTTC CTACAATTAG TAAAGCTTTG GATATCCAAG
AGCGCAGGGT TGCGGCTCAC AAGCAGAGCG TGTTGTTGAA TGGTTGCGAC TGCGGGAATA
TCCGCCATTT GGGCTGTCAC ACTGTATGGA CTGGCTTTTC AGCACCGAAC GGCCAAGCGA
GACAACAACA ACAACAACGG CTCCCAGCCT CGGCGGGGTC GCGACCGCTA TCGCCCACAG
GATAACGTTG GCTCACAGTC GAACCGGCTG CCACGTGGAC GACTAGTACC AGACGACTCA
AGTAGAAAAA CCGGCGATGT CCTACCTCCA CCTCCACCCT TGACGTCCGC AGATCGACCA
AGACCGTCCT ACTTTACTTG TCGACACATG TACGAAAACA TTTTGATGGA GGAGCTGCAA
CGCATAGCGC AGAACGAAAG GCTGGCTTTA ACGTCCCCGT TTCCAGGCGT GGTGCGGATA
GAGCCGAACC ACGCACTCGA TACTAGCCTT TGGGATCCGG TATACGCTCT TCAGGCTTTA
CCAAACGCTG TCGTCGTTTC GGGACAATCC ATCAATGATT TAGCCCAAGA AGTAGAGACG
GCATTGCTGG CCGAGGACAT GCATATAAGG ACAGTCACTG CCTTGCGAGC TGCACCACGT
GGGAGTTTGG CCGTACACGC TCTCGTCCCG GGAATGTGCA AGGGACAAGG AAAGCCGCTG
TCCCAACGAC GGTGTACGAA AGTCTCCGAA AAGTTGGTCG ACCGGCTTCG GCCCCAATTT
GCGGCGGCGC GCAAGTTGGC TTCTTCCAAC TATACTCTAC CGCCTTGCAA TTTGGGTCGG
CAGGACCAGC CGGAGCGCTG GGTTTGGCAA GTCTTGTTGC TGACTCCCAC TGTAGTGACG
GCGAGTTTGA CCCGATGTTC CACGTTTTCG TCCGGAGCCA CCTGGCCAAA CTGGCACCTG
CCTGCCGGTA TGGCACAAGT GGACATTGAG GGAGGGGAGC GCGACATTCC TAGTTCGGCT
TACCGCAAGC TCCTGGAAGC TTTTTGGTGT TGGCGCAATA CTCCTATTCC CGGCTCCCAG
GTTGTGGATT TGGGGGCTTC ACCGGGGGGA TGGACCGCCG TTTTAAGACG GCTCGGCTGC
AGTGTGACCG CAGTGGATCG GACAGTCCTG GCATCGAATC TTATGAACGA CGACGGCGTA
ACGTTCGTGC AAGGGGATGC CTTTGCTTTC GTTCCGGAGT ACATTAAATT GGAAAGTACT
GTCTTGGACA AGGCTATTGA TGATACTTGG ATGGTGTCGG ACATCATTGC GTATCCCGAT
CGTATTCACC AACTTTTGTC CCGTTGGTGT GGGAATCATT GGGCCCAATT TGTGGTGGTG
ACGATCAAAT TTCAAGGCTC CCAAATAACG TGGTCCGACA TTGACACTGC CATTGATATC
TGCCGAGGCC ATGGATACGA AGCGCGCGTG AAACACTTTT TCAACAATAA GAATGAAGTC
ACGTTAATGG CCCATGAGAA GCGGGACCTA CCGAGAGATG GCTCGCGGTA TGATTTTGGT
AGACCATTCT ATCCTTTGAC AATCCCGGTT CCCGATTCGT CTATCACATG CTGA
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| Protein sequence | MVATAGISAI WAVTLYGLAF QHRTAKRDNN NNNGSQPRRG RDRYRPQDNV GSQSNRLPRG
RLVPDDSSRK TGDVLPPPPP LTSADRPRPS YFTCRHMYEN ILMEELQRIA QNERLALTSP
FPGVVRIEPN HALDTSLWDP VYALQALPNA VVVSGQSIND LAQEVETALL AEDMHIRTVT
ALRAAPRGSL AVHALVPGMC KGQGKPLSQR RCTKVSEKLV DRLRPQFAAA RKLASSNYTL
PPCNLGRQDQ PERWVWQVLL LTPTVVTASL TRCSTFSSGA TWPNWHLPAG MAQVDIEGGE
RDIPSSAYRK LLEAFWCWRN TPIPGSQVVD LGASPGGWTA VLRRLGCSVT AVDRTVLASN
LMNDDGVTFV QGDAFAFVPE YIKLESTVLD KAIDDTWMVS DIIAYPDRIH QLLSRWCGNH
WAQFVVVTIK FQGSQITWSD IDTAIDICRG HGYEARVKHF FNNKNEVTLM AHEKRDLPRD
GSRYDFGRPF YPLTIPVPDS SITC
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