| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50492 |
|---|
| Symbol | |
|---|
| ID | 7199326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011698 |
|---|
| Strand | + |
|---|
| Start bp | 203493 |
|---|
| End bp | 204863 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185399 |
|---|
| Protein GI | 219130494 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.498831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGGAAGAATC CAGCGATCAA CGAGGAAAAC GATCATTTTC GGTTTGCTCG GATTTTGATT
CCCCCCCGGT CTCCCGTAAC ACACAAGACT CTGACTGGAT CCTTGTCCTT TGTTCCTTTC
TAGAGACTGG CAAGTGAATA CTACTTCACC ATGCTTGCTC ACAAGTTTCA TTCACGTCCT
TCATTGATCT CTTGCAACAG CACGCACGGA ATACGTTCCG ATTCGAATCG CGGGTTTGAC
AACTCCACCA CGTCGCTTTC CGTGGAGTCG CGGTCTCATC CGGGGCCATC GTGGAAACGT
GCGCTGCCCG TGTCTGGAAT GCTGGATGCA TCCGCCGCTC TCTTGCTTCT CCAAGTTGGC
AAGATTGCTA CCGACGAAGT TCAGAAAGAT TCTCTGGTGT ACCAGCCATC CTTGTTCGGA
AACGTTCCTC CCCACACGGA GAGCTCCGTT TTCTCCTCCG ATGAAGATTC CGATCGAGCA
GAATTTGTTC CGGGGGAAGC CCGCATAAGT GCGCGCCACC GATGCCGTAC CGTCTCGGTT
GATGTGCTGG AATATCAAGG ACGACGAACG CAAACACAAC ATTCGCAGCG ACCCCGTCTC
CTTGCTGGTC CCGTGATTCA TACCGTCCCA CCTTCTCCCA CGGGACCAAA GCCGATCAAG
TCTCTAAGTA CAACTACAAC TGCTTCGACC CTGTCCCTGG ACGGAATCAC TACTAAAAAC
CCGAGTACTT CCGCAAGCGA ACCTTTGGTC GTTCCCCACA AGCCTTCCGC GAATCTCGTG
GGGATCACCA CCGCACACGG AAGGAGCGTC AAGGGTGTGC TACGGCGTAA ATTCTCTTGG
AAGAATTTCC CCGAACTGGA AACCTACCTG ATCGATAATC GTCAACAGTA TTTGCAGTAC
AGTTCCCAGC TAAACTACAC TTCGGAACAA AAGCGCTACA ACAACCGTCT CACGCAAGGC
CTGCTGGATT TGGCTGCCGA GGAAGGTTAC GTCTTTGAAG ACTTTACCTT CGCGGCCATT
CGCGACCGGA TTCGTTGCTA CTACAAATCC TGCGTGCAGG CCGCCAAGAA GAAAAAGCGC
AAGCGTCGCA AGTAAACGCA AAAGTCACGC GCAAGCGTTG TTGACCCAAA CCCGTTTTTC
GGATTGTGTC TGCGGAGCCA GACATTTTCC GCCCTCCACC GTGCATACGC CATTCATCTC
CATATCGTCC ACGCAAACCT GCACACGAAC CTACACGTTC ACAACCCTCT CACTACTATA
TTTCTTGCAT ATATACAAGC GTCAAGTGCC AGTCTCGGCC AAGTCGCGAG TTTTGATCCA
TTTTTCGTCT AGCGAGTAAA TCAACTTTAC TAGTCTCTGA TTGCATACCA A
|
|---|
| Protein sequence | MLAHKFHSRP SLISCNSTHG IRSDSNRGFD NSTTSLSVES RSHPGPSWKR ALPVSGMLDA
SAALLLLQVG KIATDEVQKD SLVYQPSLFG NVPPHTESSV FSSDEDSDRA EFVPGEARIS
ARHRCRTVSV DVLEYQGRRT QTQHSQRPRL LAGPVIHTVP PSPTGPKPIK SLSTTTTAST
LSLDGITTKN PSTSASEPLV VPHKPSANLV GITTAHGRSV KGVLRRKFSW KNFPELETYL
IDNRQQYLQY SSQLNYTSEQ KRYNNRLTQG LLDLAAEEGY VFEDFTFAAI RDRIRCYYKS
CVQAAKKKKR KRRK
|
|---|
| |