Gene PHATRDRAFT_50481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50481 
Symbol 
ID7199321 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp178337 
End bp179432 
Gene Length1096 bp 
Protein Length309 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185441 
Protein GI219130582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTGACTATC ATTTGACAGA ATTGAGGCGT AGGGGGCTTT CGATCCTCGA AACACAACAT 
CTTTCTAAAT ATGAATGTTT CCGTAAAACA ACCAGAGACA GGGGGGGCAC TTTGTCATTT
AGTTGAGGCT GCAACGGCTT TGGCAAACTT GACTTCTGTC AATGAAGTCA GAACTGGCGT
TACGAAGACT TCGACGGGTG CAAACAGTCC TCCGACTGAT GAGGGCATGA TTGTCAGTGA
TGAAGAAGAG GCTCGAAAGA TAGCACCTAT GGTATTGTCA AATTGTAGCA GTGCTGGGAC
TGGAAACTGT AAGCGCGACA TATTTCCGCA GCGCCTTCTA GCGATTTTGA GCGAATCATC
CCTATCTGAC ATTATCACTT GGCTTCCACA TGGACGTTCG TTCGTCATCA TACGTCCCGA
TGTGTTTACG GTCAAGATTT TGCCAAAATA CTTGCCTCCC GTTGATGCTC GCGGATCACC
CAAGTACGCA TCCTTCACGA GAAAACTCAA CCGATGGTAA GCCACTCGGT AGTCAAAAGA
GTGGGAAGCA GGTGCAGGTG CATAGATGAG TTTCTCACTC AATTCTGTTT TTCACTACTT
CTTCGATATC AGGGGGTTTC GTCAGGCAAC TCGGGGCCCT GACACTGGCG CCTTCTACCA
TCCCCTCTTC TGTAGAGATC AACCAGACCT CTGCTTGGAT ATGGTGTGTC AGCGATCTCG
CGATCGCAAA GGTGGCGAAT GTGACAAAAA TCGTAGCCAA AGCAATTTGC CTCCCAAAAA
GCGGTCCCCT GAAATCAATG AATCCATAAA CAAAATCACT CCTCTCACCA AACAGGCTTT
GGATTCTATG ATGTCGCCAG AACCCTCATT AATGAAGAGA CCAAATACAG TATCGGTCGA
TGACAATCGT TCCGTGGCAT CCGCATGCAA CTCAGCTTCT ACTGTGTCGT CAAACCTGTC
TCTACCACCG CCTAGAATAT CCAGCGACTC TTTGCTGGTA ATCGCGGCAC TGCAACGGCG
TGATGAAAAT GAGCGTATCA AGGTTGCGAA AGCTATGTTA TACGAGTCAT ACTTAAAGGC
CAAAGAAGGG CAATAA
 
Protein sequence
MNVSVKQPET GGALCHLVEA ATALANLTSV NEVRTGVTKT STGANSPPTD EGMIVSDEEE 
ARKIAPMVLS NCSSAGTGNC KRDIFPQRLL AILSESSLSD IITWLPHGRS FVIIRPDVFT
VKILPKYLPP VDARGSPKYA SFTRKLNRWG FRQATRGPDT GAFYHPLFCR DQPDLCLDMV
CQRSRDRKGG ECDKNRSQSN LPPKKRSPEI NESINKITPL TKQALDSMMS PEPSLMKRPN
TVSVDDNRSV ASACNSASTV SSNLSLPPPR ISSDSLLVIA ALQRRDENER IKVAKAMLYE
SYLKAKEGQ