| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50444 |
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| Symbol | UGP/PGM |
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| ID | 7199256 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011698 |
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| Strand | + |
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| Start bp | 79779 |
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| End bp | 83661 |
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| Gene Length | 3883 bp |
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| Protein Length | 1057 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | UDP-Glucose- Pyrophosphorylase/Phosphoglucomutase |
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| Protein accession | XP_002185375 |
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| Protein GI | 219130444 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00884767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTCGAAAGAC GAACAACGAG CCTCCCGAAT ATCCTACGGT TGGTTGCTTA ATAACATTGC
TTTGACAACT CAAGATGCCT TCTTTCGATC CCATTCGTGT AAGTAAAGTA CCACGTACAC
AAGCATGATG TTTGAAACTG AAGCGGCTCT AGTTCGAGCG GCGCGGTTGA ATCGGAATCG
CTAACTCGCG TTTTCGATGA CGACGACGGC CAGTCTACTT ATTCTTTGTG CTACTGTAGG
ATCTCTCTGC ATGTTCTCTC ACTGTGAATT TGCGTTCCTT CAGGCAAAAA TGGAAGCCGG
AGGCTGTGCT CCATCGGCGA TTGCCGCCTT CGAGTCGACC TATGGTAGTC TCGTCTCGGG
TGATTCCGGA ATGATTTTGG AAGACTCTAT TGCGCCCGTC CCCCAGCTGG ACAAGACCGC
GGAGCTGGAT ATTGCACCCA ACGCCACCCT TCTTGCCGAG ACGGTAGTTC TCAAACTCAA
TGGTGGACTC GGCACGGGTA TGGGTCTGGA CAAGGCCAAG TCCCTGTTGC CAGTCAAGGG
GGACGACACC TTTTTGGATT TGACCGCCAA ACAAGTCATT CAAATGCGTA AGGAATACGG
TTTGAACGTC AAGTTTATGC TCATGAATTC GTTTTCTACT TCCGACGATA CCTTGAGCTT
TTTGAGTTCC AAATACCCTG ATCTTGCTTC CGAGGAAGGT TTAGAAATGA TGCAAAATAA
GGTCCCCAAG TTGAACGCGG AGACTCTCGA GGTATGAATT TGGTAGTCGA ATGGATACAG
GTGACCACTC TCATCGGGTT GACTTCTGAC GCCATTTCTT TGCTTCTTTG GATTAGCCGG
CATCTTGTGA ATCCGATCCG GAAAATGAGT GGTGTCCGCC GGGACACGGT GACTTGTACG
CGGCCTTGGT TGGCTCTGGT CGTCTTGATG CCCTGCTCAA GGAAGGGTTC AAATATATGT
TTGTCTCCAA TTCGGACAAC CTTGGTGCTA GCCTGGACCT TGAAATTCTG ACTTACTTTG
CCGAGAAGAA TGTACCCTTC TTGATGGAGT GCTGCGAACG TACAGAAAAC GACAAAAAGG
GAGGGCACTT GGCCGTCCGC AAATCCGATG GACAACTTAT TCTTCGGGAA TCTGCTATGT
GCGCTGAAGA GGATGAAGAT GCATTCAGTG ATATCAGCAA GCACCGCTTT TTCAACACCA
ACAATTTGTG GGTTCGTCTC GATAAACTCA AGGAGATCAT CGACCGCAAT GGCGGCTTTA
TTCCTCTGCC CATGATCAAA AACAAAAAGA CGGTCGACCC CAAGGACGAC TCGTCGACCC
CGGTACTGCA GTTGGAAACC GCTATGGGTG CCGCTATTGA ATGTTTCGAA GGCGCCAGCG
CGGTGGTTGT TCCTCGCACA CGCTTTGCGC CCGTCAAAAA GTGCAGCGAT CTGCTCTTGC
TGCGCTCCGA TGCATACTTG CTCGTGGACC ACAAGCCGGT ACTCAATCCA GCCTGCAACG
GGAGCGCGCC CGTGATCAAT CTCGACAGCA AACTATACAA GCTGGTCGGC GCCTTGGAAG
AAGCAACCCA GGACGGCATT CCGTCCCTCG TCAAGTGCGA CAAATTGACT ATCAAGGGTT
TGGTCCGGAT GTCGAAAAAG ACCAAGTTTG TGGGTGATGT CAAGATTGTC AACTCGAGCG
CCGAATCTAA GTTTGTGCCC ACCGGTGAAG TAACAGGGGA ACACGATCTG ACGTCTAATG
CTGGTCTTGG CAAGCTAAAG CCCACCTCTG TTTCAACAGC ACCAATTGCG GGACAAAAGC
CTGGTACTTC AGGACTCCGG AAGAAGGTTG CCGAATTCAA GAAGGAAAAC TACCTTAACA
ATTTTGTACA AGCTGCTTTT GACGCCATCA AGGCCAGTGG TACGGACATA TCGAAGGGGT
CCTTGGTAAT TGGTGGTGAT GGTCGCTACT TCAACCCTGA AGCAATCCAA ATACTTATTC
AGATGGGTGT TGCTAACGGC GTCAGACGTT TCTGGATTGG ACAGGACGGC CTCTTGTCGA
CACCCGCCGT TTCTGCGATC ATTCGGGAAG GCGGCCCGCG TTGGCAAAAG GCATTTGGAG
CCTTTATTTT GACGGCTAGT CACAATCCCG GTGGCCCAAC GGAAGATTTT GGTATCAAGT
ACAACTGCGA ACATGGTGAG CCCGCTCCGG AGAGGATGAC GGATGAAATT TACGCCAACA
CAACGACGAT TAAGTCCTAC AAGATTTGTA AGGAATTCCC CAACATTGAC ATTGGCGCTG
CGGGCCACTC CAAGATCATG TCTGACGACG GCAGCGCCGA AGTCAATATT GAAGTAATTG
ATTCCACCGA AGCTCACGTC AAGTTGTTGA AATCTATTTT TGATTTCTCG GCCATCAGAG
GGCTGTTGGA TCGCCCCGAC TTTTCCATGG TCTACGACGC CATGCACGGT GTCAACGGGC
CGTACGTAAA AAAAGTATTC TGCGATATTC TGGGGCAGGA CCTCTCCGTC ACACTGAACT
GTGTCCCCAA GGACGACTTC AACGGAGGCC ATGCCGACCC CAACCTCACG TACGCCAAAG
AGCTTGTTGC CGTCATGGGG CTTAATCGCA AGGGCGAAAA GATCGATATG GGCGGACGTC
CTATTCCCAG CTTTGGTGCG GCCGCCGACG GCGACGGAGA CCGCAACATG ATTCTGGGCA
CACAGTTTTT TGTCAGTCCG TCCGATTCCT TGGCAGTCAT TGTTGCCAAC GCCGACACCA
TTCCATTCTT CCGCACGCAA GGTGGACTCA AGGGCGTCGC GCGGTCCATG CCAACGTCCG
GCGCCGTCGA TCTCGTCGCC AAGGACCTGA ACTACAGTTT GTTTGAAACA CCTACGGGAT
GGAAATACTT CGGGAACCTG ATGGATTCCA AAGAGCTTTT TGACGGTGCC GAATACACTC
CGTTTATTTG TGGGGAAGAA TCGTTCGGCA CAGGCTCCGA TCACATTCGC GAAAAGGACG
GACTTTGGGC CGTGCTGGCT TGGCTCAGCA TTTTGGCGCA CGCCAATACT AACAGCCTAA
GTGACACACT GGTGACCGTG GAAGACATTG TCAAGGCTCA TTGGGCAAAG TACGGACGCA
ACTACTACAG CCGCTGGGAT TTCGAGAACA TGAATGCGAC CAAGGCGAAC GCCATGATGG
ACAAGATGCG GGCGGAAACA GACGCGAACA CGGGCAAGAC GGTGGGCAAG TACTCGATCG
AAAAGTCCGA CGACTTTGTG TACGTGGATC CCGTGGACGG CTCGGTGGCC AAGAAGCAGG
GGATGCGGTT CCTAATGACG GATGGCTCGC GGATTATTTT CCGTTTGAGT GGCACGGCGG
GCAGTGGCGC CACGGTCCGC ATGTACATCG AACAGTACGA ACCGACGAAG ATTGACATGG
TGGCTTCAGA GGCTTTGGCA GATTTGATTC GAGTCGCACT GGATTTATCT GACCTCAAGG
GATTCCTCGG AACTGAAGAA CCAACCGTAA TTACGTAACT GATGTTCGAG CTCTGGCAAC
ACGTCCTGCT AGGTCTCAGT GTGGCTAACT AAACGAGCCA GCCAGAACAG TTTCCTCCGT
CTGATATATG AATGATGTGA CTCGCTCAGG AATCGATTCG TAATTGTCGA GTAGAGCAAC
TTAATAGTGC AACAACGATA GCCCTAGTGC AAAATCCTCG TCTCGTTTCG ATGGGTTCAT
GCATCCTAAT GCAAGCTGAA TATTTCGTTG TCTATCCGAG TAATACAAAG AGAAAATTCG
GTATTTGGGA TGAGCAGGGG TGAAATTTTC GCTATTTGGG AAAAATCACA CTGTTTCTAA
GTGTTTTTAT TTTCGCGGGA AATACTTTCT AAGTAATCTT TTT
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| Protein sequence | MPSFDPIRAK MEAGGCAPSA IAAFESTYGS LVSGDSGMIL EDSIAPVPQL DKTAELDIAP
NATLLAETVV LKLNGGLGTG MGLDKAKSLL PVKGDDTFLD LTAKQVIQMR KEYGLNVKFM
LMNSFSTSDD TLSFLSSKYP DLASEEGLEM MQNKVPKLNA ETLEPASCES DPENEWCPPG
HGDLYAALVG SGRLDALLKE GFKYMFVSNS DNLGASLDLE ILTYFAEKNV PFLMECCERT
ENDKKGGHLA VRKSDGQLIL RESAMCAEED EDAFSDISKH RFFNTNNLWV RLDKLKEIID
RNGGFIPLPM IKNKKTVDPK DDSSTPVLQL ETAMGAAIEC FEGASAVVVP RTRFAPVKKC
SDLLLLRSDA YLLVDHKPVL NPACNGSAPV INLDSKLYKL VGALEEATQD GIPSLVKCDK
LTIKGLVRMS KKTKFVGDVK IVNSSAESKF VPTGEVTGEH DLTSNAGLGK LKPTSVSTAP
IAGQKPGTSG LRKKVAEFKK ENYLNNFVQA AFDAIKASGT DISKGSLVIG GDGRYFNPEA
IQILIQMGVA NGVRRFWIGQ DGLLSTPAVS AIIREGGPRW QKAFGAFILT ASHNPGGPTE
DFGIKYNCEH GEPAPERMTD EIYANTTTIK SYKICKEFPN IDIGAAGHSK IMSDDGSAEV
NIEVIDSTEA HVKLLKSIFD FSAIRGLLDR PDFSMVYDAM HGVNGPYVKK VFCDILGQDL
SVTLNCVPKD DFNGGHADPN LTYAKELVAV MGLNRKGEKI DMGGRPIPSF GAAADGDGDR
NMILGTQFFV SPSDSLAVIV ANADTIPFFR TQGGLKGVAR SMPTSGAVDL VAKDLNYSLF
ETPTGWKYFG NLMDSKELFD GAEYTPFICG EESFGTGSDH IREKDGLWAV LAWLSILAHA
NTNSLSDTLV TVEDIVKAHW AKYGRNYYSR WDFENMNATK ANAMMDKMRA ETDANTGKTV
GKYSIEKSDD FVYVDPVDGS VAKKQGMRFL MTDGSRIIFR LSGTAGSGAT VRMYIEQYEP
TKIDMVASEA LADLIRVALD LSDLKGFLGT EEPTVIT
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