| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50443 |
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| Symbol | |
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| ID | 7199255 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011698 |
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| Strand | + |
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| Start bp | 77117 |
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| End bp | 78819 |
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| Gene Length | 1703 bp |
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| Protein Length | 517 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185374 |
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| Protein GI | 219130442 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00232774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGCTTTGTGA GATCCAAATA TCGACTCACT CTTTTCAGGA TCAGCTACAA GCCATTAACC
TTCTGTAGCT TGTAGCTACC CCCTTGATAT TCGTATTCAA GGCTAAAAAG TATGAAATTT
CTCCATTCTG CTCTGATAGT TTTGACATCG GCTTCGGCGT CGTCTGCGTT TACCGCTACC
AATGTTCCGC TGAAAAGACC TACCGTCTAC AATAAAAGCA GTTTTTCTGC TTATCGCAGT
ACGGCTCTTC GGTCAGCGGT TGCCCCGAAG ATTTCATCCG TCAATGGAAA GCAGCAGGTT
CCACAACAAA CAGAATCAGC AAAAAAAATG TGGCTTATGA TTGCGATGAA GACGCCAACT
GCGTCATCGT CGACGCATGC GACGACGAAC AATGCCGAAC TTCGCTCGAC GTTCGCATTC
ACGGAAAATG GTATGATCTC TCCGGCTGGC GCAAGGCTCA CCCTGCTGGA GCCCACTGGA
TTGACTGGTA CGATGGCCGC GATGCTACCG AAGTTATGGA TGCCTTTCAT TCCGAAAAAG
GACGCGCTAT GTACAAGCGC TTGCCTGCCA GCTCTACTGA AAGTGTCGCC ATGTTGGAAA
CTACTATTGC TCCTGACAGT TCCACACAAA TTGCTTTTCG CCAACTACGA GACGATCTGG
AAAAGGAGGG TTGGTGGAAA CGTGACATGG TGCACGAATT TACGCAGCTT GGTATTTGGG
CCTCGCTCGT GGTCGGTGCC GCCGTAACTG CACATTCAGC CCCTCCACTT GCTACTTTTT
TGTTGGGACT TTCAATGACG GCAGCCGGTT GGTTGGGCCA CGATTTCATT CACGGCGTTG
ACTCGTTCAC CGATCGCCTC CGGAATTTTG CCGGTGTTGC CGCTGGTCTC GGGCCTACCT
GGTGGTCCGA CAAGCACAAC AAGCATCACG CTTTGACCAA TGAACAAGGC GTAGATGAGG
ATATTGCTAC GGATCCTTTC TTATTCACGT GGGCGCCGGA TCCTAAGGAT GATTCACCCT
TGCGCAAAAT CCAGCACTTG ATTTTCTGGG TTCCATTCTC GGCACTTTTT GCGCTGTGGC
GTGTCGATAC CATGCAGGTA GTAATTGAAG CCGTCGAAAA CAAGCGTGTC GGGGCAAAAG
GTGAACTGTA TGGACTTTTA CTGCACTATG CTGTGTTGTT TACTGTCTTT CCGGTCACTG
TCTGGCTTCC CGCGATCTTT TTGAGCGGAC TGATGTCAGC CTTGATCGTC ACGCCCACGC
ACCAATCCGA AGAAATGTTT GAAACTTATC AGCCAGATTG GGTCACGGCG CAGTTCCAAT
CGACCCGCAA CGCAGTAACC ACCAATCCTT TTTCCGAATG GCTCTGGGGC GGCATGCAGT
ACCAACTCGA ACACCATTTG TTTCCTTCTA TGCCACGCAA TCGCTATCCG GCACTGCGCG
AACGCCTAAT TCAGTTTGCC GCGGACAATA AGATTCCCGG TGGCTACCGA GAAAGCGGCG
AGTTTGAAAT TCTACGCATG AATTGGAATC TTTACAAGTC GGTGGCGGAA GCAGATGCGG
TCCCTGGTGC ACCTCCTACT CGTGGTCGTC TAGGACAGCA AGGTGCAATT CGCGAAACAA
ACAGTCCGGC TGCTCAGCAA GAAAAGGCGA AGATCGACCA GACGGTAGCA AAGGGGAATG
GCCCGGCGTT GGAATCTGTG TAG
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| Protein sequence | MKFLHSALIV LTSASASSAF TATNFFCLSQ YGSSVSGCPE DFIRQWKAAG STTNRISKKN
VAYDCDEDAN CVIVDACDDE QCRTSLDVRI HGKWYDLSGW RKAHPAGAHW IDWYDGRDAT
EVMDAFHSEK GRAMYKRLPA SSTESVAMLE TTIAPDSSTQ IAFRQLRDDL EKEGWWKRDM
VHEFTQLGIW ASLVVGAAVT AHSAPPLATF LLGLSMTAAG WLGHDFIHGV DSFTDRLRNF
AGVAAGLGPT WWSDKHNKHH ALTNEQGVDE DIATDPFLFT WAPDPKDDSP LRKIQHLIFW
VPFSALFALW RVDTMQVVIE AVENKRVGAK GELYGLLLHY AVLFTVFPVT VWLPAIFLSG
LMSALIVTPT HQSEEMFETY QPDWVTAQFQ STRNAVTTNP FSEWLWGGMQ YQLEHHLFPS
MPRNRYPALR ERLIQFAADN KIPGGYRESG EFEILRMNWN LYKSVAEADA VPGAPPTRGR
LGQQGAIRET NSPAAQQEKA KIDQTVAKGN GPALESV
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