| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50442 |
|---|
| Symbol | |
|---|
| ID | 7199254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011698 |
|---|
| Strand | - |
|---|
| Start bp | 73222 |
|---|
| End bp | 74169 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185424 |
|---|
| Protein GI | 219130546 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.526697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCAGGATTA TTGCTTGACA CTCTATCGTA TGCGTCGAAG CAATCCAACT AGTACTTGAC
TTTCCTCTGT TTTCTTCACA GGTAGAGAAG TCTTCGCTCA ACGTCGCTCG ACAACGCCCT
CTGAACCGCC ACGAGTCGCT TCAATTCGAT CAAGTTCGAG GTTGACAAGC CTCCATTGCG
TGAAAACGAT GGCAATTTAT GAGAAAGAAC TGAACACAGC CAGCAACACG GTGTACGAAA
TGAAGACGGC TGACTATGCC GAGCTGCTCA GCATGCCCGG AAATAGTGTG TGTGCTGACT
GTGGGGCGGT CAACCCGAAC TGGGGATCAC CGAAGCTCGG AATCTTGTTT TGCACCGATT
GTAGTGGTAA ACATAGGTAA GTCTCCGGTA GCTTCTTACC TATCTACATC ATCAGAGAAG
ATAGAGCTCG CGCCGAGACG TTGGCTCACA GAAAAATTTG TCATTGTATT GAAAAATCTA
TCATTTTTTG TCCATAACAG GGGCCTAGGT ACGCACATTT CCTTTGTGCG ATCAGTCCAT
ATGGATGCTT GGACCGACCA GCAACTACAG TATATGAGAT TGGGAGGAAA CGATCGCTGT
CGAACGTATT TGCAAGAGCA CGGCGTACCG GTGGACGCGG ATACCAGTGT CCGCGACAAG
TATGACAACG ATGTGGCCGA GCTATATCGT TGTCGGTTGC AAGCCCGTGT CGAAGGAATA
ACGGAGCCGA CGCTATTGCC ACCTCGGAAA CCGAAACCAA CAGTTACTGG CAAGCAACGC
ATGCAAGGAT TCGGAAGCAG TGCTGCCCCG ACGCCTTCGA AGAATGCTTC GAAAGCAATT
TTGCTGGGAG TTCCAATCGT TGTGGCGGCG GCAATTGGGG GTTTGCTGTA TTTGCGACAG
TAGGACAACA AGGGTGACTT GTAATGTAAA ACTAGAAAAT ATTTGTAC
|
|---|
| Protein sequence | MAIYEKELNT ASNTVYEMKT ADYAELLSMP GNSVCADCGA VNPNWGSPKL GILFCTDCSG
KHRGLGTHIS FVRSVHMDAW TDQQLQYMRL GGNDRCRTYL QEHGVPVDAD TSVRDKYDND
VAELYRCRLQ ARVEGITEPT LLPPRKPKPT VTGKQRMQGF GSSAAPTPSK NASKAILLGV
PIVVAAAIGG LLYLRQ
|
|---|
| |