| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50429 |
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| Symbol | |
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| ID | 7199298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011698 |
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| Strand | - |
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| Start bp | 6159 |
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| End bp | 9059 |
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| Gene Length | 2901 bp |
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| Protein Length | 958 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185418 |
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| Protein GI | 219130534 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0883829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTACTA AACATATAAG CCGTGTCCAT ACGGTGCCGT CAAGACCGCA AAACTCCAAT
TGGTACCGGA TTCCTTTGGT CGCTGCTACC GTTTGCACTG TGTTCTCCGG TTTCTATTCA
CTCCGTGTAC TTGACTGTCC TTTTGCTGGT TCCTCGGAAG CACAGCTGTC CACGAAATGG
CCAGCTCCAT CTATTATTGC GTCAAAATCG TCACCAAGCC AAGCGACAGT AACATCTGAT
GATAACGGCT GCCGACCGCT AGCCAATGGT GGTCCAGTAA GTCTGGTCTG GGCGTATGAC
GATCCACCCA CGTTGGAGGC CATGAAAAGA ACCATGGAAG GACTTGCGTC TGCCTTGCCG
GGAATTCAAG TAGCTGTATA CTGTGGCTCA AGTTTATGTG TAACTGTCGC ACACAAGGCC
GTCCCTAAAC GCTCCTGCAT CTGGATCCAG CATATGGTCG CACCGAGGTT GGCGCAAGAT
TCTCCACTGG AGGACTGGGT TGGAGATCAT GTTTTGGCGA AGCTCTTATC AGCGAATCAT
TTCGAACAAA CTCTTCAAGT TGTTATGCAA CTTGTTGTTA TCTGGAAGTA TGGTGGTATG
GTACTCTTAC CGGGGTCCGA CGTGTTGAAT GCCAGTGATC TTGGATCATT GGGTCAAGAC
GATGCCGTGC TCTTGACGGC TGATGATCAA ATGCTAGTGA AGCCGGGCTC TGGCGGTGGT
CTCTATGCTG TAGCGGCCCC CCCTACAAAT AAAGTCATTG AAGCTCTCAT GGATGAGATG
CTACATGTTT ATCAGTGGCC AAAATACGTC GCGTCCAATT GGCCAGTAAA CATACAGTGG
GATGTCCTAT GCGCCAGAAT GACGATCTGT CTTGATGCTC AGCTATCTCT TTTAAATATG
GGAATAACAA CAGAAACAGA GTCCGTTATG GAGCGTCGCC CTGGAAGACA TTTTGGGACA
CTCAGCTATC AGGCGAGGCG GCACTCCTTG AAGGTTGTAG GTGATCACAA CATGAATAAA
GGTGATGAAA TGCAGGGGCT AGCAGGCCTG CAGTTTCGTG GGATCCCCGG GTACCTTGTA
GAAAGAGACA GACTTGACGT AGTGAGTGTA ATTGCCTCCA AAAACTTTTC TGCCACAGGT
GAAGTGACTG TTCACTCCCC ATCTCAATCA GCGTTGACGC CAACAACAGT GTTCCTCAAT
GCCTGGTGGG GGGATGGGAA TTGGATCTGG CCTCCGCCTG GAAAACTGGA GCCTGTCTTT
GTTTCAATGC ATCTTAACAA CAACAAAATC AAACAGGACG TCAACAAATC AAAGGCATAC
TTAAACCAAC ACTGGCCTAT TGGGGCTCGT GACACGGAAT CACAAAGGTT CTTGAAGTCA
ATTGGTGTCC ACTCTGTCTT TTCAGGGTGC ATGACAATGA CTCTCCTACC AACCTGGAGT
AAATGGCGTG CTTCGAAGGA GCAGAACAAT GAGGTTTTAA TTGTCGACGT CAACAAAAAT
GGTCTCCAGC TGTTACCGGA CCACATCACG TTGGGCGCTG TGAAGCTTTC GGCAAACCTT
GTGAACAAAA GTGTTATAGA TGACCAGGTG GCAAGATACT TTTTAGCTAA CGAAATGAAG
CTTCGCTTGC AAAAGGCCAA GCTGGTTATC ACTCAGCGTC TCCACATTGC GTTACCGGCT
GCCTCCATGG GGACGCCCGT GATTCTGATC ATGGATCACA ATATGCCCGG AGGTGGAGGT
GTCGATGGGG CGCGTTTTAG CGGTCTACAG GATGCCGTAC ACACTGTAAA CACTGTCAAT
GGGTCAGAAG CTCTTGCTTC CTTCAATTGG GATCAGCCGC CACCTAACCC CAACCCAGCA
TTTCTTGAGG TCAAGCGAAA TGCGCTTCAA GTGTTAACAA TGTGTCATGG GGAACTAACT
GATTCTGCAA GAAAGTTTGG TGTTATTCCA ACATCATGGG AGTACCCTCC TGAAGCGGAT
GTGTGTAGAG CAACCAAGGA AGACCATTAT GACAATGATG CCATTCACAT TGCAACCGCA
ATCAATCCGA TGTGGCTACA CTCCAAGCCA ATTCTCTCCA GCTGGATTCA TGCACTGTAC
AAGTCCAACC CAAGAGAACA ATTTGTGTTC TATTTCCTTG CGGATAATAT GAATGCCAAG
CAGCGGTGCA TTGTCCGGTG GATGGTGCTT CGATGGTTCC CCAACGCAAA GGTGTACACA
ATACCGCTGG ACCAAGCACA TGTGGGCATT CCAAAGATGT TTCGAGAACA TGCTGCCAAG
CTTCTTTTGC CACGGGTTCT TCCGTGTGTG GGAAAAGCTC TTTGGATTGA TAGTGATGCC
ATTATCCTAA AGTCACTTAG GCCAATGTGG TCTACCTCAA AGGTCATCCC AAATTGTGGT
ATTGTCGCCA GGAACTCTGC GAAAAAAACG TCAATTGGTG CTTTGATGAC AGCTCTGAAT
GCTACAACCC CCTCACAATT ACTGAAGAAA GACAGTTTAG ACATACCGAT TTTTGACACT
GCGGTGATGG TTCTAGACCT TGGAAAATTG CGCAGAAGTC GCTTTATAGA AACGGTAGCT
TCGTACTGGT CATTTACGCT TGGTGGAGAT GTCCAAATTT CCATGAACAT GCAATGTAAT
GGAACTCATG GAAAACTTGA CTCGGCTTGG AACATGTTCT TGGACGATTC AGAAGATTCC
GTGTTCACAA TCAATGATAT TAGCGAGTGG CGTATTGTTC ATTTTCAAGG TCAACAAAAG
CCATGGGTTG ATAAGACTAA CTCACTTCAA CGCAAGATTT GGTCAAAGCA TGCCCTGTCT
TTGTTTGATG CACTGTATGG GCCAGTCCCG ACAAGGAAAC TCAATGTCAA TACCTAAATT
ATGAAAAGTA TCTTAAAGAT T
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| Protein sequence | MVTKHISRVH TVPSRPQNSN WYRIPLVAAT VCTVFSGFYS LRVLDCPFAG SSEAQLSTKW
PAPSIIASKS SPSQATVTSD DNGCRPLANG GPVSLVWAYD DPPTLEAMKR TMEGLASALP
GIQVAVYCGS SLCVTVAHKA VPKRSCIWIQ HMVAPRLAQD SPLEDWVGDH VLAKLLSANH
FEQTLQVVMQ LVVIWKYGGM VLLPGSDVLN ASDLGSLGQD DAVLLTADDQ MLVKPGSGGG
LYAVAAPPTN KVIEALMDEM LHVYQWPKYV ASNWPVNIQW DVLCARMTIC LDAQLSLLNM
GITTETESVM ERRPGRHFGT LSYQARRHSL KVVGDHNMNK GDEMQGLAGL QFRGIPGYLV
ERDRLDVVSV IASKNFSATG EVTVHSPSQS ALTPTTVFLN AWWGDGNWIW PPPGKLEPVF
VSMHLNNNKI KQDVNKSKAY LNQHWPIGAR DTESQRFLKS IGVHSVFSGC MTMTLLPTWS
KWRASKEQNN EVLIVDVNKN GLQLLPDHIT LGAVKLSANL VNKSVIDDQV ARYFLANEMK
LRLQKAKLVI TQRLHIALPA ASMGTPVILI MDHNMPGGGG VDGARFSGLQ DAVHTVNTVN
GSEALASFNW DQPPPNPNPA FLEVKRNALQ VLTMCHGELT DSARKFGVIP TSWEYPPEAD
VCRATKEDHY DNDAIHIATA INPMWLHSKP ILSSWIHALY KSNPREQFVF YFLADNMNAK
QRCIVRWMVL RWFPNAKVYT IPLDQAHVGI PKMFREHAAK LLLPRVLPCV GKALWIDSDA
IILKSLRPMW STSKVIPNCG IVARNSAKKT SIGALMTALN ATTPSQLLKK DSLDIPIFDT
AVMVLDLGKL RRSRFIETVA SYWSFTLGGD VQISMNMQCN GTHGKLDSAW NMFLDDSEDS
VFTINDISEW RIVHFQGQQK PWVDKTNSLQ RKIWSKHALS LFDALYGPVP TRKLNVNT
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