Gene PHATRDRAFT_41403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41403 
Symbol 
ID7199305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp75526 
End bp76350 
Gene Length825 bp 
Protein Length274 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185373 
Protein GI219130440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.0716194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGCC ACAGCATTCA GACTCGCACT GATGCCTACA AATGTGTTAT TGCACTCAAC 
AATATCGGAG TATCGCTAAT GGAACGTGGA GCATATCTAC AGGCCGCGCA AACCTTTAAG
GAGGCCGTGG TTGCTCTGCA ATTGGCGATG CGAGTGGGCC TTCCTCTAGA CTTCGACGAA
CAACACGCCG TCAGCTTGGC CGCAATTCAT GAATCTGTCC GTTCCGCTTA CCAACGAGTC
GCAAAATCCG TGCTTTCGTC TGTCGCTACA AGAACCGAAT GCTTGCATGC CCCCGAAGTT
TCGGTCAGAT CAATTTCCAA CGATGAATGG GATCCTATCG TAATGAAGTC GATTCTCGCT
GACTCCGAGC ATTCTTTTTT TTCGAATCCC CTGTGCATTC GCATTGAACC CTCCACATGC
GGATTCGAGC AAGAGTTAGG CGACTGCGAG CTCAATGCAG CTATCTTATT GCAAAATTTT
GGTGTCGCTC AAATGTGCTT GCTAGCGACA ACATCAATAC GAGAAAAAAC TTGCCGGTAT
CAGAGTGGCG CCATGAAACT CTTTCGAATC GCCCATACGA TCCTTTTGCA ACACCGTGGT
GTCATCGAGC ACAACGAGAA TGATCAGTTG CACACCACTT TAATGATTAC GTCCGCTACA
ACGCTCAATA GCCTCGGCCA ACTGCTCTTG CTCGGAAACC GCGAAGAAGA AGCCTCACAA
GTTTCGGCCA ATCTGGCAGC TTTGGTGGAT TCCGTGACGG AAACCGAAAA CCTTCTGGGC
CACGAATACT ATTTAAAAAC CAGCCGCTCG GCAGCTGCAG CATAG
 
Protein sequence
MASHSIQTRT DAYKCVIALN NIGVSLMERG AYLQAAQTFK EAVVALQLAM RVGLPLDFDE 
QHAVSLAAIH ESVRSAYQRV AKSVLSSVAT RTECLHAPEV SVRSISNDEW DPIVMKSILA
DSEHSFFSNP LCIRIEPSTC GFEQELGDCE LNAAILLQNF GVAQMCLLAT TSIREKTCRY
QSGAMKLFRI AHTILLQHRG VIEHNENDQL HTTLMITSAT TLNSLGQLLL LGNREEEASQ
VSANLAALVD SVTETENLLG HEYYLKTSRS AAAA