Gene PHATRDRAFT_31234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31234 
Symbol 
ID7199265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp127321 
End bp128176 
Gene Length856 bp 
Protein Length174 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185430 
Protein GI219130559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.066629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCAAATCCAA GAACCGCATT CCGAAAATAC GACTTCCACC ACGACGCCAA AGGCGTGGTT 
CGCCTTGAGC AAGCCTATTC GCTCCGTGCC CGATGCGGAC GCCGACCACG ACCGGCAACG
TCCGCGTCCG CCGCCACGTA ATGGATCATT CCGGAACCGT GGAGACGAGA AACTGGGGAA
TCGTGTCGAG AAATCGCCCA CCGACGACGA TACCGATACG CTCCATCCAG CGGTCCCTTG
GGCTGTTCTT GCCGCGGCTC TCGTGCTGTC GGCCGGAGCC GTCACCACCG CCGGTAACAG
TATCCATCTC GATCCGCTCC TGGAACCGTT CCGGATGGCT TCTAGTGAGG GAGGCGCGGT
ACCGACGCTC GCTGCCACGA TTACCAACGT CTGGAATCAT CCGCAGGAAG TTTTGAGCGA
GCTTGCGGAA GGTATCCGAG ATTTAGGACC CCTCGGAGTC GTCTACTTTG GTATCCTCTA
TACCGTGGCC GAAATACTGG CCGTACCCGC TACACCGTTG ACCCTCTCGG CCGGTTACTT
ATTCGGCCTT ACCCAGGGCG TCGCAGTCGT CCTTATTGCG GCTACCGTAG CCGCCAGTGT
GGCGTTTGTC GTCGGGAAAA CCGTACTCCG CAGTTGGGTG GAAGGAATCC TCGAGGAAAA
TCCTCGCATG GCCAAACTCG ACGCCGCCAT TGGGAAAGAA GGCTTCCAAC TCCTTCTCCT
GGTCCGACTG TCCCCCATTT TCCCCTTTGC CTTGTCGAAT TACGTATACG GTGCCTCCAG
TATTTCCTTC GGGAGTTACT TCTGTGCCAC CCTGCTGGGC TTTGCGCCTG GTACCGTCGC
CTACGTTTAC ACCGGT
 
Protein sequence
MASSEGGAVP TLAATITNVW NHPQEVLSEL AEGIRDLGPL GVVYFGILYT VAEILAVPAT 
PLTLSAGYLF GLTQGVAVVL IAATVAASVA FVVGKTVLRS WVEGILEENP RMAKLDAAIG
KEGFQLLLLV RLSPIFPFAL SNYVYGASSI SFGSYFCATL LGFAPGTVAY VYTG