Gene PHATRDRAFT_50417 details

Gene Information

• Locus tag: PHATRDRAFT_50417
• ID: 7199223
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011697
• Strand: +
• Start bp: 307445
• End bp: 309752
• Gene Length: 2308 bp
• Protein Length: 553 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002185305
• Protein GI: 219130298

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0862329
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCACGGTCA ATGCCTTTTA CGCTTAAAAG GGTAAGGCCC AAGGCAAGAC GCAACTCCTA 
CCTCGCTAGT TGTTAGAACG TCTAATGCGT GGTGGTGGTG TACCGACAAT CCCTTGCTAG 
AGGTTTCGTT AGTTGCTCGA AGCTACCGGA TCGCCATCCT CTTGGTTGCG TCGACTCCGA 
GCCACCAATT CTCAGCACAC AGTCTCTCCG ACTCTTATCC AACACACACC TCTGGTGTGG 
GTGTTGGTGT GTGTTTCTGT GGCTGTACCT ACATCCATAC GTACGTATTG ATTTATATAT 
AGTCCGTGCG CTCGCTACCG ACAGTCACAA TGACCACAAT GACGACTCAG TCCAGTGGGA 
CGGGAGTGAG GATATCACCC TTGTCTCTTT TGACGCATCT GCTCGTGGGT CTCGCCGGTC 
TCCAACTGGG TCTCGTCATT GGGGGATACA CGGTGATCCA CACGGGCAGC GACGCTGCAA 
CTACCGTCAC CACTAGTGGT GATAGTAGTA GTAGTAGTAC CGGTGCCAAC GCCGACGCCG 
TTGTTGGTAT CCCGTGTGGG CGAGACACCA CCGACGCTAC GATTCGCGAA TTACGCCTGA 
AACTAGCGCA CGCCCTCGCG GAGGCTTCCG CCGAAACTAC CCTGCCCGAG ACTCTTCAGG 
GGTTCGTGGC CGGGATGGGA CGCGTCGATC GCGACGAATT TATCCAGCGA TTCGATGTCG 
GTGTGCCGTG GGATGCCAAG CAACCCGGCA ATAAGGAAGT TCTCCTGCTG TACAATCACC 
CATTGTCCCT GCCCCGTAAT GGAAGCAGCG ACGCATCGTC CAACACCATT CCTCGCTACG 
AATCGATCAA CGACGCCGTC CAGAACTGTC ACCAAATGAA AATAGTGCTA CAGAAACCGA 
ATCAACCCAA CGTCTGTTGG GCCGTCGTGG GACAGTGGGA TTCGCACCAC GTCCAGAAAC 
TCATGCGACT GCCGCCAGAA CATAGTTTGT CGACCAAAAA GGCTGTCTCC GAGGGATTCC 
CGCTCCGCTA CGTCTCTCGC AACCATTTGC CCAACGGTCG CCAGACGAGA GTTCCCACCG 
GTACTTCCTA CTTCCCCATC CTACACGACT ATCTCGGCAA ACTGGAAGCC ACGCTCGCCC 
GCCTCAGTCC CGTCGCCGCG CAAGCGGCGG ACCCCCACAA CTCTCTCGTC GTGCTCGTTT 
GCAACCACGG ACAATCGGAA CTCTTGTGGA ATTTCGTTTG TGCCGCGCGA TCACGGTCGC 
TAAATCTCGC GCACGTCCTC GTCTTTGCGA CCGACTCGGT GACGTACGAT CTCGCGGTCG 
CCATGGGTCT GCACGCAATG GACGTCCAGA ACGCCTTTGG TGACATGCCC ACGGTTGCGG 
CCAGGCGCTA CGGTGACGCC GCCTTTACCG GAATGATGAT GAGCAAGGTC TACGTCATGC 
ATCTACTCAT CACTCTAGGA TACAACGTGC TCTTCCAAGA TGTCGACGTG GTGTGGTACC 
AGGATCCCCT CGCGTATTTC AATAACGACC AGTCCGATTT TGATTTGTTC TTTCAAGACG 
ATGGAGCGCA TTGTAAGTGT CGCGCATCCT GTATTTTTGT GGATGGTTGT GCGGAGGGTT 
GTTGTCGAAC GGCAAGCACT ATGACTTTCA CGAGGGCGAA GCGCTCCGGT GGTCGTTGAA 
TACGGTCTTC CTGTCCGGTT TGGTGTATCG AATTTTTTAT AGGCCCTTCA CCGTGTGGTC 
GGACCTCAGC GTTGCTAACC TTTTCTTTCA CACTTATTTT GTTAGCTCCA CGGTATGCTC 
CGTACAGTCC AAATACGGGA TTATACTTTG TCCGCCACAA CGAGCGTACG GAGTTTTTCT 
TTTCCACGTT GGCCCGCATG GGTGATTTGA TTCAAGCCTC GGGTTCGCAT CAATCCGCTC 
TCAACGCGCT TTTAGCCGAA CACGCATCCT GGCGCGGACT CAAGGTTAAA GTATTTGGGA 
CCAGCACGGA CCAGGGTGAA CTTTTTCCCG GTGGGTACCA TTTTCACCGA CGCAAAGGCT 
TCATGAAAGA AATGTTAGTT ACCAAAAGTG TACACCCGTA CGTCTTTCAC ATGTCATGGA 
CGATGAATAG TATCAACAAA CAGCGATTCT TTCGACAGAT GGGAGACTGG TTCGTCCAAG 
AAGCTTGCAT TGGCAAAACT CTGGACGATA TTGGGACGGA CGATTCGCCG GACGTTGTAT 
CTAAATGCTG TGCTGCCGAG GCGCTTGTAT CCTGCCACTA TAGCGACAAG CCGAGTATTA 
TACCGTGCAA GGACAGTCCT TCGATTGA 

 

Protein sequence

MTTMTTQSSG TGVRISPLSL LTHLLVGLAG LQLGLVIGGY TVIHTGSDAA TTVTTSGDSS 
SSSTGANADA VVGIPCGRDT TDATIRELRL KLAHALAEAS AETTLPETLQ GFVAGMGRVD 
RDEFIQRFDV GVPWDAKQPG NKEVLLLYNH PLSLPRNGSS DASSNTIPRY ESINDAVQNC 
HQMKIVLQKP NQPNVCWAVV GQWDSHHVQK LMRLPPEHSL STKKAVSEGF PLRYVSRNHL 
PNGRQTRVPT GTSYFPILHD YLGKLEATLA RLSPVAAQAA DPHNSLVVLV CNHGQSELLW 
NFVCAARSRS LNLAHVLVFA TDSVTYDLAV AMGLHAMDVQ NAFGDMPTVA ARRYGDAAFT 
GMMMSKVYVM HLLITLGYNV LFQDVDVVWY QDPLAYFNND QSDFDLFFQD DGAHSPRYAP 
YSPNTGLYFV RHNERTEFFF STLARMGDLI QASGSHQSAL NALLAEHASW RGLKVKVFGT 
STDQGELFPG GYHFHRRKGF MKEIINKQRF FRQMGDWFVQ EACIGKTLDD IGTDDSPDVR 
QAEYYTVQGQ SFD