| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50416 |
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| Symbol | |
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| ID | 7199222 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011697 |
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| Strand | - |
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| Start bp | 305040 |
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| End bp | 306926 |
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| Gene Length | 1887 bp |
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| Protein Length | 483 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185360 |
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| Protein GI | 219130412 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0136502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAATTTACAG TTATTGCGTT TCTTACAGTT AAGACCCCTA TTGCTGATGC TTTCGTTGCG
TACACTCTCG GTGTATTCCT TCCCTGCACT GTCACCGACG AGCTTGCCAT CCAAAACACT
CGTGTTGCCT CGTAACAACC ACGCGAAACG GTGGCTCGTG TTGCTCGGGA GGAGAGCCAA
AGCATTATTG GTAGTGGTGT GTCGGGGAGT GCTTGACCTG GGAGTCTTCG ATCGCCTCCG
TACTCCTCCT CGCACGCACA CCTCTTTGGG AGCGACTCTC TCTCTCTCTC TGTGAAGCTG
TAGTGGAGAA ATGCTACCGT CCAATCACAA TCACACGGGG GTACCGGTGG TAGGGACCGG
ACCCCCACGG AGGTCATCGT CGGCCAAGCA CAACCTACAC GGCAACGCCA GTCACCATCG
CAACGGATCG TCTCTGCTTT CCTCATCCAC CATCCTCCTC GTATTGGCGA CGGCTATTCC
TAGTTTCTTT CTAGGCACAC TTACTTGCTT ATTCGCCGGT ATTGATTGTC AACATCAGTC
GTCGGCGACT GTGAACCTCC TGGAAGCCTG GCGCAGTGCC GATCGCGAAT CCACAAGCTG
CACTGCCAGC AGTATCGAGC ATCAGCTACA GGCACGGATA CAGACACTAC AAGCTCAGTG
GGAGGCCGAT CTAGAGACCA AAATACAACA ACGCACTCGG CAAATGGTCA AACCAGACGG
CAGCGATACG TCCACGTCGG GGTACCATCG CGATTGGCTC TTTCCCTCGG ACCGGACCGG
CCGCTTCGTC ACCGCCTTGG TGCGGACGCC CAAACTCGGC TTGGTCGATA ACCTCGATCT
CGGAGTGCCT GTGGACCCAC CCGGCAAGGG CTACGAAGAT GTCCTGCTAC TCTACAGTCG
CGAGTCCACC TTGCCACAGC CCGTCCGGGA CGATCCCACC CTGACCTTTA TGGCCAACAC
CACCGCCGCA CTCGAGCACT GCGATTTCGT CAACGTCGTA CTTACGGAAC ACAGCGCCGG
TCGGAAACAG TGTATCGCCG TCGTGCCGCA GTACGAATCC TACCACTTGC AAAAATGGAT
GCGGGCCCAT CCGCAATCGG GAAAATTGGA CACTGCCGTC CCGCTGAGAC TCGTCAGTCG
CGGACACGCT GATAACGGCA GACAAAACTT TATACCACCG GCGCTCGATG ACGCCCGACA
GGCCTGGGAA GTGCTGAAAC AGTATCTGGA TAGTGTCGAT GCGGTCTTGG AGGAACTGAA
ACCGCTACTG GAAAATATTG CGATTGAGAA CACCGTTATC GTCATGGTGG TGAACTTTGG
TCAAACCGAG TTACTCATGA ACTTTGTATG CGCCGCCAAA TCCCGATCAT TGGATTTGTC
CAACGTCATT GTCTTTACTA CCGATCAAGA GTCGACCGAT CTGGCCACGT CTTTGGGACT
GACCGCTTAC TATGACCAAC GGGTACGTGT TTTGCTCACG GGAGGACCGG TTGACGGAGG
GTAGGGCGGT GGTGGATACT GATCAAATAA GTCTCACACT CATTTTTAAA ATATTGATGT
AGAACTTTGG AGAAATTCCC TCCGAAGCCG CCCGGCGGTA CGGTGACCGC CGCTTCACCG
CCATGATGAT GGCTAAAGTC ATCTGCGTCC AGCTCGTCTC CATGCTCGGT TACGACTTGC
TCTTCCAAGA CGTCGACATT GTTTGGTTTT CCAACCCTCT CGAATACTTT GCCCACGCCG
ACCCTGGCAT GGATATGTTT TTTCAAGACG ACGGCGCCCA TTCTACTCGC TACGCTCCGT
ATTCCGCCAA TTCTGGACTG TACTTTGTCC GCCACAACCG TCGCACCCGA CACTTTCTCA
CCAGCCTACT CATGGTGGGC GACCTGA
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| Protein sequence | MLPSNHNHTG VPVVGTGPPR RSSSAKHNLH GNASHHRNGS SLLSSSTILL VLATAIPSFF
LGTLTCLFAG IDCQHQSSAT VNLLEAWRSA DRESTSCTAS SIEHQLQARI QTLQAQWEAD
LETKIQQRTR QMVKPDGSDT STSGYHRDWL FPSDRTGRFV TALVRTPKLG LVDNLDLGVP
VDPPGKGYED VLLLYSREST LPQPVRDDPT LTFMANTTAA LEHCDFVNVV LTEHSAGRKQ
CIAVVPQYES YHLQKWMRAH PQSGKLDTAV PLRLVSRGHA DNGRQNFIPP ALDDARQAWE
VLKQYLDSVD AVLEELKPLL ENIAIENTVI VMVVNFGQTE LLMNFVCAAK SRSLDLSNVI
VFTTDQESTD LATSLGLTAY YDQRNFGEIP SEAARRYGDR RFTAMMMAKV ICVQLVSMLG
YDLLFQDVDI VWFSNPLEYF AHADPGMDMF FQDDGAHSTR YAPYSANSGL YFVRHNPYSW
WAT
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